KEGG   Malus domestica (apple): 103426727
Entry
103426727         CDS       T03194                                 
Name
(RefSeq) cell division cycle protein 27 homolog B isoform X1
  KO
K03350  anaphase-promoting complex subunit 3
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103426727
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103426727
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103426727
   03036 Chromosome and associated proteins [BR:mdm03036]
    103426727
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     103426727
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Other subunits
     103426727
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    103426727
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 ANAPC3 TPR_12 TPR_11 TPR_19 TPR_17 TPR_14 TPR_16 TPR_CcmH_CycH TPR_10 TPR_9 TPR_6 ARM_TT21_C TPR_15 TPR-S DUF7017 ANAPC8 ARM_TT21 TPR_Slam T7SS_EccA1_N HrpB1_HrpK ChAPs SRP_TPR_like TPR_21 Ribonuclease_T2 Coatomer_E NatA_aux_su
Other DBs
NCBI-GeneID: 103426727
NCBI-ProteinID: XP_028966212
LinkDB
Position
02:join(4873385..4873489,4874036..4874108,4874234..4874343,4874590..4874636,4875154..4875251,4875522..4875826,4877108..4877260,4877611..4877824,4878128..4878351,4878445..4878510,4879036..4879155,4879415..4879491,4879604..4879723,4879848..4880067,4880243..4880524,4880646..4880693)
AA seq 753 aa
MEAILRDCVQHSLRDFMHRNAIFVCERLCAEFPSETNLQLLAGCYLQSNQAYAVYHILKG
TQVAQCRYLFALSCFQMDLLSEAEAALCPANERGAEVPNGAAGHYLLGLIYRYTDRRKSA
IHHFKQALTIDPCMWTAYEELCILGAAEEAAVVFGEAAVLSIQKQYLHHGLASQSLLTLN
EDCNLVSGRNFSSEDVGQRQLKHVQGNNTRDLSGNSHVSLGGVSGHPVNGTSGSSFFNTP
SPMPMQLSGVAPPALCRIGQPNGPNLSTGTDSSLKSNVSSTIQAPRRKFVDEGKLRKISS
RLSFDSGNRRSNRLAAEAGANTNVSASVTAGNGTTNSSKYLGSSKLSSVARSFANRKGQP
WPNENVDEGMRNETYDDSRSTTVTVASGFTPSDTRYLEQEGATLSSTGGIINVSRVATGA
SEILSLLRTLGEGYRLSCMYRCQDALNVYLKLPYKHYNTGWVLSQVGKAYCELIDYSEAD
RAFSLARQASPYSLEGMDMYSTVLYHLKEDMKLSYLAQELISTDRLAPQSWVAMGNCYSL
QKDHETALKNFQRAVQLNPRFTYAHTLCGHEYVALEDFENGIKSYQNALRIDARHYNAWY
GLGMVYHRQEKFEFSEHHFRTAFQINSRSSVIMTYLASALHALKRSEEALVMMEKAIRAD
KKNPLPMYHKASILMSLEKFDEALAVLEEVKEYSPRESSVYALMGKIYKRRNMHEKAMLH
FGYALDLKPSATDVATIKADIEKLHVPDELDDE
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggaagcgatacttcgagactgtgtccagcacagtctccgtgatttcatgcaccggaac
gccattttcgtatgcgaacgcctctgtgccgagttcccctccgagacgaatttacagttg
ttagctggctgttacttgcaaagcaaccaagcttatgctgtatatcatattttaaaggga
acacaagtggctcaatgccgctacttgtttgcactatcatgctttcagatggatcttcta
agtgaagcagaagcagcgttatgtcctgctaatgagcgtggtgctgaggttccaaatggc
gcagctggtcattaccttttagggcttatatacaggtatactgacagaaggaaaagtgcc
atccatcactttaagcaggctttgactattgatccttgtatgtggactgcttacgaagag
ctgtgcatattaggtgctgctgaagaagcagctgtagtttttggtgaagctgccgttctt
tccatacaaaaacagtatctacatcatggattagcttctcaaagtttacttaccctgaat
gaggactgcaatttagtttctggcaggaattttagctctgaagatgttggccagagacaa
ttgaaacatgttcaaggaaataatacaagagatttgtctggaaattctcatgttagtttg
ggcggagtgtctggtcatcctgtaaatggcacttctggttcatctttctttaacactcct
tccccaatgcccatgcagttgtcaggtgttgctccaccagctctctgtagaattggccag
ccaaatggcccaaacctgagcacaggtaccgatagctctctgaagtcaaatgtgagctct
acaattcaagcccccagaagaaagtttgttgatgaaggaaaactccgcaagatttcaagc
aggttgtcttttgattctggcaaccggcggagcaatagacttgctgctgaagcgggggcc
aacactaatgtcagtgcctcagtgacagccggaaatggaactaccaattcatctaaatat
cttggaagttccaagctgagctctgttgcacgttccttcgcaaatcgtaaggggcagcca
tggcccaatgaaaatgttgatgaaggaatgcgcaatgagacatatgatgattcccgttca
acaactgtgacagtagcttctggttttactcctagtgatactagatatcttgaacaagaa
ggagcaaccttgtcaagtactggtggtattatcaatgtttcaagagttgccactggtgct
tcagaaatattgagtcttttgagaacccttggggagggctatagactttcctgcatgtac
agatgtcaggatgcactcaatgtctatctcaaacttccatacaagcattacaatacagga
tgggtgctttcccaggttggaaaagcttattgtgaattgatagactattcagaagctgat
cgggccttcagtcttgcccgtcaggcatcaccttacagtttagaagggatggatatgtat
tctacagttctttatcatttgaaggaagatatgaagttaagttacctggctcaagaactg
atatcaacggaccgcttagctcctcagtcttgggttgcaatgggaaattgctatagcttg
cagaaagaccatgaaactgctctgaaaaattttcagcgagctgttcaacttaatccaaga
ttcacatatgcgcataccctttgtggtcatgaatatgtagctctagaggattttgagaat
ggaataaagagttatcagaacgcacttcgtattgatgcaaggcattataacgcctggtat
ggccttggaatggtatatcatcgccaagagaagtttgagttctcggagcatcacttccgg
acggctttccaaatcaattcacgttcttctgttattatgacttatcttgcctcagcattg
catgctttaaagcgaagcgaagaagctctagtgatgatggagaaggctattagggcggac
aagaagaatccacttccaatgtatcataaggctagtatactaatgagtttagaaaagttc
gatgaagctttagcggtcttagaggaggttaaagaatactctcctcgcgaaagtagtgtc
tacgctttgatgggtaagatctataagcggcgtaacatgcatgagaaagcaatgcttcat
tttggttatgcattggatttgaaaccatcggcaactgatgtcgctaccattaaggctgac
attgagaagttacatgtacctgatgaactagacgatgagtag

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