KEGG   Malus domestica (apple): 103426785
Entry
103426785         CDS       T03194                                 
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 3
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103426785
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103426785
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103426785
SSDB
Motif
Pfam: PA Rhodanese zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-ANAPC11 zf_RING_Vps8 zf-RING_16 zf-RING_4 Prok-RING_4
Other DBs
NCBI-GeneID: 103426785
NCBI-ProteinID: XP_070667623
LinkDB
Position
02:complement(join(10057705..10057872,10058151..10058204,10058314..10058384,10058470..10058549,10058784..10058883,10058998..10059178,10060002..10060146,10060444..10060472,10060762..10060859,10061318..10061716,10061868..10062095,10062485..10062605))
AA seq 557 aa
MREAVVGFFVVVYLQLLQLSSANIVLQPSGILIPDLPAKYAVAVGGSEICGALLVADPLD
ACLPLRYGVQSNETDITRFALVERGECTFEDKVQHAQNAGFHAVIVYDNRREKLVHMTIN
SKNVTIRAVFVSKASGEMLKEHARGEEGECCIFVLPNEKAWSVFAVCFISFLTVLGLLVI
ALCAQRNWSWTTQGRNQLPKSADTKIVDALPCFTFSSAGLDECHTEETCAICLENYKDSE
ILKVLPCQHEFHSSCVDSWLKKWGRNCPVCKNDIRKKIANAEIKRKTWLYNYNHEASSVI
TIVTSNIVSVVSFQGCSCFLWTSIQTPLECVPLRGLKRHKGILPVFPTEKRNTAAAVRFL
SPPFPSSAGFSRKINQTANRFHKNQSYLYNTSSSSWVLLEVVLLCCSSESEVVTVDVQEA
KHLLESGYGYLEVRTEEEYKKGHVDTKKILNIPYMFNTPKGMVKNPQFLEEVSSACNKDD
LIVVGCQSGVRSLYATADLLAAGFKNVSNMGGGYLAWIEHDFPVTKPEDADRKKPEDVVQ
PKKAEDVDQQKKAKEEL
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagggaagccgtagtgggattctttgtggttgtttatcttcagcttctccaacttagc
tcagctaacattgttctccaaccatctggaattcttatccccgaccttcccgccaaatat
gctgttgctgtcggcggctctgaaatatgtggagctttgcttgtagcagaccctttggat
gcctgcttgcctctgcgctatggtgttcaatcaaatgaaactgatataacaaggtttgct
ttagtagaaagaggtgaatgtacttttgaggataaagtgcaacacgctcaaaatgccgga
tttcatgctgtgattgtttacgataatagaagagaaaaattggttcacatgacgataaac
agcaagaatgttacaattcgtgctgtatttgtttccaaagcatctggtgaaatgctaaag
gaacatgctcgtggggaagaaggggaatgctgcatcttcgtattaccaaatgaaaaggcc
tggtcggtgttcgctgtatgtttcatctcatttctaactgtattgggtctccttgtgatt
gccctctgtgctcagagaaactggagctggactactcaaggaagaaaccaacttcctaaa
agtgctgataccaagattgtggatgctctaccttgcttcacattcagttctgccggtttg
gatgaatgccacactgaagaaacttgtgccatctgccttgagaattacaaagattccgaa
attcttaaagttctcccctgccaacatgaatttcattcaagctgtgtggattcatggctg
aaaaaatgggggagaaactgccccgtgtgcaagaacgatataagaaagaaaattgcgaat
gctgagatcaagagaaaaacctggttatacaattacaaccatgaggcttcttctgtcatc
accattgtcacatccaacattgtgtctgttgtttcttttcagggttgctcctgttttttg
tggacatccatacaaacgccactcgaatgtgttccattgcgtggattgaagagacataag
ggaattcttccggtcttccccacagaaaaacgaaacaccgcagcagcagtaaggttcctc
agcccaccttttccatcctcagctggtttttcccggaaaatcaaccaaacagccaacaga
tttcacaaaaaccagagctacttatataacaccagttcttcctcatgggttctattggaa
gttgttctgttatgctgtagctcggaatcggaagttgtcaccgttgatgttcaagaagca
aaacatctgctcgaatctggctatggttatttggaagttaggacggaggaggagtacaag
aaagggcatgtggatacaaagaagattctgaacattccttacatgttcaatacacctaaa
ggtatggtgaaaaatccccagtttttggaagaggtttcatctgcctgcaacaaagatgac
cttattgttgtgggttgtcaaagtggtgttagatccctttatgcaactgctgatcttctg
gctgctggtttcaagaatgtgagcaacatgggaggaggctatctcgcttggatcgagcat
gattttccggttactaagccggaagacgctgaccggaaaaagccagaagatgttgtgcaa
ccgaaaaaggcagaagatgtagaccagcagaagaaagcaaaagaagagctctag

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