KEGG   Malus domestica (apple): 103427277
Entry
103427277         CDS       T03194                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103427277
   03036 Chromosome and associated proteins [BR:mdm03036]
    103427277
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     103427277
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     103427277
    SLIK complex
     103427277
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C ResIII HDA2-3 DEAD Chromo_MIT1 COG4_m DpnD_N KH_PARP14_5
Other DBs
NCBI-GeneID: 103427277
NCBI-ProteinID: XP_070674430
LinkDB
Position
03:complement(join(21893494..21893936,21894172..21894265,21894351..21894701,21895059..21895240,21895341..21895518,21895649..21895804,21897561..21897797,21897891..21897971,21898238..21898417,21898634..21898720,21898875..21898985,21899107..21899349,21900399..21900611,21901593..21901656,21901745..21901869,21901985..21902078,21903195..21903262,21903348..21903539,21903619..21903753,21903896..21903983,21904089..21904182,21910466..21910529,21911631..21911682,21911900..21912003,21912095..21912154,21912769..21912852,21913019..21913243,21915122..21915535,21915980..21916047,21916199..21916937))
AA seq 1741 aa
MAFFRNYSNDTVSRSVLEEKTLGQSVERIHSSTGNEDVDVNSYEKEFDINMDVQYQSEGE
HEDASRLHNEAAEDEVIGTKFSNLPTSGRRTAVAGKWGSTFWKDCQPMRSQGGSDSGQET
KSGLDYRNAIGSEDNSSDVKEDGIDFEDEGKPKVSKGQRGHSDIPADEMLSDEYYEQDGE
EQSESMRYRGFHHSIGSNSRPQSKPNSVSDRAHYRTSRNDIEDFEDGDDANEDLDAADAD
YEEDEDEDDPDDADFEPDSGVGSGRTAQKDKDWNGEDSDDDNDSDDELDVSDEDDSYYGK
KPKSRHRGNAKSTRERKSYHSSSRQRRGKSSFDDDESSAEDSESDSDEDFKSIKRKGVHT
RKKNGRRNVTGQNGEVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEIEEEDGDYIEK
VLWHQPKGMAEDALRNNRSTDPVLLSHLFDSEPDWNHMEFLIKWKGQSHLHCQWKSISEL
QNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQVERIIADRIR
QDTSGDVGPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEFKVREAAMAVQGKMVDLQRK
RSKGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFNNDK
IVGRPVKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSSGKDGSKLERTILSSGKLVILDKLLMKLHETKHRVLIFS
QMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKESKKGTLFDKNELSSILRFGAEELFKEEKNDEESKKRLLSMD
IDEILERAEKVEEKETAEEGNELLSAFKVANFGTAEDDGSFWSRWIKPEAVSQAEEALAP
RATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKADYTVTSVPMIDGASAQVRGWSS
GNLSKRDALRFSRAVMKFGNESQIALIVEEVGGAVAAASTDAQVELFNALIDGCTEAVEV
GSLDPKGPLLDFYGVPVKAGDLLNRVRELQHLAKRISRYDDPVAQFRVLKYLKPSNWSKG
CGWNQIDDARLLIGIYYHGFGNWEKIRLDARLGLTKKIAPVELQHHETFLPRAPNLRDRA
NALLEMEIAALSGKNANVKVGRKASKEREATRNVSLARSGPKKGKTSSSRANFPTNKDRP
LKPQKVEPLVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLNRLERLQMISANLP
KEKVLSQIRSYLQLLGRTIDQIVLENEKEPYGQDRMSMRLWNYVSTFSNLSGERLHQIYS
KLKQHQDVEAGPSHMNGSASGPFGRDNDSSPFSFHSDRQRGPDTAKFEAWKRRRRGEADS
NIQVQAQSQRNMNNGTRLTDPSSLGILGAGPSENKRAVNERPYRTRQTGLPTKQGFTSGI
K
NT seq 5226 nt   +upstreamnt  +downstreamnt
atggctttttttaggaactattctaacgatacagtttcacgaagtgtcctggaagaaaaa
accctaggacaaagtgttgaaagaattcatagctccacagggaatgaagatgtggatgta
aattcttatgaaaaggaatttgatatcaacatggatgttcagtatcaaagtgaaggcgaa
catgaagatgctagtaggttgcacaatgaggcagcagaagatgaggttattggtacaaaa
ttttccaatttacccacttctgggaggagaacagctgtggctggaaagtggggttcaacc
ttttggaaggactgtcaacctatgcgctcacagggtgggtctgattctggtcaggaaact
aaaagtgggttggactacagaaatgctattggatctgaagataattcttcggatgtcaag
gaagatggaatcgattttgaagatgagggcaagccgaaagtaagcaagggacaacggggc
cattctgacatccctgcagatgaaatgttatctgatgaatattatgagcaggatggggaa
gaacagagtgaatcaatgcgctatagagggtttcatcactccattgggtcaaattctagg
ccacaatcaaagcctaattcagtcagcgaccgtgcacactatagaacttctagaaatgat
attgaagattttgaagatggtgatgatgccaacgaagatcttgatgctgctgatgctgat
tatgaagaagacgaagatgaagatgatcctgatgatgccgattttgaacctgattctggt
gttggaagtggtcgcactgcacagaaggataaagattggaatggtgaagattctgatgat
gataatgatagtgatgatgagcttgatgtttcagatgaagatgattcttattatggaaag
aaacctaagagtaggcatcgtggtaatgctaaatctacaagggaacgcaaatcatatcat
tcatctagtcggcaaagaagagggaagtcatcgtttgatgatgatgagtcctcagcagag
gactccgaaagtgacagtgacgaggattttaaaagtattaaaaggaaaggtgtacatacg
cgcaagaagaatggccgaagaaatgttactggacaaaatggtgaggtacgaacttctact
aggtctgttaggaaggtctcatatgttgaaagtgatggaagtgatgaagttgaagaagga
aagaaaaagaagtcccagaaggaggagattgaagaagaggatggtgactatattgaaaag
gtgctttggcatcagcctaagggcatggctgaagatgctctgaggaacaatagatcaacg
gatcctgtgctattaagtcacttgtttgattctgagccagattggaatcatatggagttc
ttgataaaatggaaagggcagtcccatttgcactgtcaatggaaatcaatttccgagcta
caaaatcttagcggttttaagaaggttttaaattacactaaaaaggtgatggaagatgcc
aggtacaggaacacaatatcacgtgaggagattgaggttcatgatgtgagcaaggaaatg
gacttagatctcatcaagcagaatagtcaggtggagagaataattgcagaccgcatcagg
caagatacctctggcgatgtgggtccggaatatctagtcaagtggcaaggattgtcttat
gctgaagcaacatgggagaaggatgtagatattgcgtttgcacaagatgctattgatgag
ttcaaggttcgtgaagctgcaatggctgtacaagggaaaatggtggatctccagcgcaag
aggagcaaaggaagtctaaggaagctcgaggaacaacccgaatggttaaagggaggaaag
cttcgtgattatcagcttgagggtttgaattttcttgttaatagttggaggaatgatacc
aatgtcattttagctgatgaaatgggtcttggtaaaacagttcaatcagtttcaatgctt
ggttttttacagaacgctcaacagatccacgggccatttcttgttgttgtaccattatcc
acgttgtctaactgggccaaagaatttaggaagtggctccctgatatgaatattattgtg
tatgttggtactcgtgcaagccgagaggtttgtcagcagtatgaatttaataatgataaa
atagttggccggcctgttaaattcaatgcactattgactacgtatgaggtggttttaaag
gataaggctgttctttccaagatcaagtggaattatctaatggttgatgaagctcataga
ttaaagaacagtgaggcacagttgtacacaaccctcttggaatttagcacaaagaacaag
ttgcttataactggtactcccttgcagaacagcgtagaggagttatgggctctgcttcac
ttcctcgaccctgataaattcaagaataaagatgattttgttcagaattacaaaaatctc
agttcattcaatgagattgagcttgctaatctgcatatggaattgaggcctcacattctt
cgaagagttatcaaggatgtggaaaagtctttacctcctaaaattgagcggattcttagg
gttgaaatgtctcctcttcagaaacagtattataagtggattttggaacgcaactttcat
aacttgaacaaaggagttcgtgggaatcaggtttccttgttgaatattgtggtagaattg
aagaaatgttgtaatcatccctttctgtttgaaagtgctgaccatggttatggtggggac
tcaagtggtaaagatggcagtaaattggagaggactattttaagcagcggaaagttggtt
atactcgataagcttcttatgaaattgcatgaaacaaagcaccgtgttctcatattttcc
cagatggtaagaatgttggacatactggcggagtacatgtcaattagaggttttcaattt
cagcggcttgatggaagtacaaaggctgatttacgccaccaagcaatggaacattttaat
gcgcctggtagtgaagacttttgcttcctcctttcaactcgagcaggtggccttggtatc
aaccttgccacagcggatacggttataatattcgactcagattggaatccccaaaacgac
ctgcaggcaatgagcagagctcacagaatagggcaacaagaagttgttaacatctataga
tttgtcacaagcaaaagtgtcgaggaagatatcctggagagagctaagaaaaagatggtg
cttgaccatttggtgattcaaaaattaaatgcagagggtaggttggaaaagaaagaatct
aagaaagggactttatttgacaaaaatgagctgtcttctattctacgattcggggctgag
gaacttttcaaggaagaaaaaaatgatgaagaaagcaagaaaagactcttaagtatggat
attgatgagattcttgaaagagcagaaaaggttgaagagaaggaaactgcagaggaaggg
aatgaattgttgagtgcttttaaggttgcaaattttggtactgctgaagatgatggtagt
ttttggagtcgttggataaagcctgaagcagtatcccaagccgaagaagctcttgctcct
cgtgccactaggaatactaagagctatgcagaagctgatcagcctgatagaagtaataaa
agaaaaaagaaagaatctgagcctcaggaaagagtccagaaaagacggaaagcagattat
acagtcacctcagtgcccatgattgacggagcatctgctcaagttaggggatggtcttct
gggaacttatccaagagagacgcattgcgattttctcgtgctgttatgaaatttgggaat
gagagccaaattgccttgatagttgaggaggtcggtggtgcagttgcagcagcttcaact
gatgcacaggttgagcttttcaatgcattgattgatggctgcacagaagcagtggaagtg
gggagtctggacccgaaggggccattgctggatttttatggtgtccctgtcaaagctggt
gatctgctcaaccgtgttcgtgaacttcaacacctggcaaaacgcattagtcgatatgat
gatcccgttgctcagtttcgtgtcttgaagtacctcaaaccttcaaattggtcgaaaggt
tgtggctggaatcaaattgatgatgcaagattgcttattggaatatactaccatggcttt
ggaaattgggaaaagatacgtttagatgcaaggcttggccttacaaagaaaattgctcca
gtggaacttcaacaccatgaaacatttttaccccgtgctccaaatttgagagatcgggct
aacgctcttttggaaatggaaattgcagctcttagtggaaagaatgcaaatgttaaagtg
ggtcgtaaggcttcaaaggagagggaagctactcgcaatgtttctttagctcgcagtggg
ccaaagaaaggaaaaaccagttcttctagagctaattttccaacaaacaaggacagacca
ctgaaaccccagaaagttgaacctttagtgaaagaggagggtgaaatgtcagacgatgat
gaagtgtatgagaagtttaaggaggagaaatggatggaatggtgtgaagagatgatgaag
gatgaaactaaaaccttaaatcgtcttgaacggttgcagatgattagtgccaatctccca
aaggaaaaggtgctttcccagattcgaagttatttacagcttcttggacgaacgatagat
caaattgttttagaaaatgagaaggaaccttatggacaagataggatgagcatgcgcttg
tggaactatgtttctaccttttcaaatctgtccggggagagacttcatcaaatctattca
aaacttaaacagcaccaggatgtggaggctggcccttcccacatgaatggctctgcttct
gggccctttggcagagacaatgactcttctcccttctccttccattcggacaggcaaaga
ggtcctgatacagcgaagtttgaagcatggaaacgaaggaggagaggggaagctgatagc
aatatccaagttcaggcccaatctcaaagaaatatgaataatggtacccgattaactgat
ccaagctcattagggattcttggtgcaggaccgtcagaaaataaacgcgctgtgaatgaa
aggccttataggacacggcagacaggtttaccaacaaaacaaggtttcacatcaggtatt
aagtag

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