Malus domestica (apple): 103427529
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Entry
103427529 CDS
T03194
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103427529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103427529
03036 Chromosome and associated proteins [BR:
mdm03036
]
103427529
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103427529
Coactivators
SAGA/TFTC/STAGA complex
103427529
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103427529
STAGA complex
103427529
TFTC complex
103427529
SAGA complex
103427529
SLIK complex
103427529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
103427529
NCBI-ProteinID:
XP_028948742
LinkDB
All DBs
Position
14:complement(join(2049211..2049354,2049506..2049541,2049679..2049743,2049834..2049912,2050409..2050483,2050867..2051466,2052394..2052558,2052778..2053317))
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AA seq
567 aa
AA seq
DB search
MDQQNSTTTPTPSASQPSIEPPPTAQSQPPPQPQPPPSSSLTTTPTSTPSPPSPNPNPKP
STPLPPQPLHQPQPPPQSLPPPSQPRPPSTLTRPPWQQQSHFHQYPSPSSSASSGPPPPP
SPSQPPPPRGGIAIGVSAHHTGPSTPQPTPYSSSYGHHFGGMGRGGVSVPEPVSNSSPSQ
VRPSMQGMQGIGMMGSLGSSSQMRPTGIPAHHPQRPVQSSLRPPSTASNQSPSSQNFQGH
SLLRVSSVGSASSSPNASQGLLPHTQPWLSSGPQGKPPIPSPSYRQQMNSPSMQQRSHLP
QQQQQSHPHPTASQQQHHPMPSAPQQQHHPLPSASQQQHHSLPSASPQQPLPSASQQQHT
SSAQQVQQSRVPQTTPRQQQITRVQGPVNPKSSALVAAQPNTVQSGAQNKTLSPETDESC
NRILGKRSIRELVNQIDPSEKLDPEVEEILMDIADEFVDSITTFSCSLAKHRKSTQLEAK
DILLHIEKNWNITLPGFGGDEIKGFRKPLTNDIHKERLAVIKKSIVATETANARNPTGQA
AGNAKGSLVKTPANIISSLNSKMREVT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacagaactccaccaccactccaactccctccgcctcccaaccatccattgaa
ccacccccaaccgcccaatcccagcctccacctcagcctcagccaccgccgtcctcctcc
ttaacaaccactccaacctccaccccaagccccccttccccaaaccctaaccctaaaccc
tcaaccccattgcccccacaaccactacatcaaccgcaaccgccaccccagtcccttcca
cccccttcgcagcccaggcctccctccacattgactcgtcctccttggcagcagcagtcc
cacttccaccagtacccttcgccttcttcttccgcttcgtctgggcctcctccaccgcct
tcaccctctcagcctcccccaccgaggggcggcattgccattggtgtttctgcgcatcac
accggcccttctactcctcaacccactccgtattcgtcttcctacgggcatcattttggt
gggatgggccgtggcggcgtctctgtgcccgaacctgtatccaattccagtccttcccag
gtgagaccatcaatgcaaggaatgcagggaatagggatgatgggttcactcggttctagt
tctcaaatgcggccaactgggattccggcacaccatccacagagaccagtgcaatcctct
cttagaccaccatctactgcgagtaatcagtccccgtcttcccaaaatttccaagggcac
agccttttacgagtttcatcagttggatctgctagttcatcaccaaatgcatctcaaggt
ttgctgcctcatactcagccatggttgtcatctgggccacaagggaagcctcctattcct
tccccttcatataggcagcagatgaactcgccatccatgcagcaaagatcacatcttccg
cagcaacagcaacagtctcatccccatcctacagcttcacagcagcagcaccatccaatg
ccttcagctccccagcagcagcaccatccactgccttctgcttcacagcagcagcaccat
tccctgccttctgcttcaccacaacaacccctgccttcagcttcacagcaacagcataca
tcatctgcgcaacaagttcagcaatcaagggtcccacaaaccacgcctcgtcagcaacag
atcacaagggttcagggccctgtgaatcctaagtcttccgctcttgtagctgcacagcct
aacacagtccaatcaggggcccaaaataaaactcttagtccagaaacagatgaatcttgt
aatagaattcttggcaaaagaagcatccgtgagctagtcaaccagattgatccatctgag
aagttggatccagaagttgaagaaattctcatggacattgcagatgaatttgttgattct
attacaacatttagttgctcactagccaagcatagaaaatcaactcaattagaagcaaaa
gacatacttctacatattgaaaagaattggaatataactctgcctgggttcggtggtgat
gagattaaaggcttcagaaaaccacttacaaatgatatccacaaggagcgtcttgctgtg
ataaagaagtccatagtagcaactgagacagcaaatgctaggaatcccactggacaagct
gcgggaaatgcaaagggtagtcttgttaagacacctgccaacatcataagctccctgaac
tctaaaatgcgtgaagttacataa
DBGET
integrated database retrieval system
