KEGG   Malus domestica (apple): 103427770
Entry
103427770         CDS       T03194                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103427770
   03460 Fanconi anemia pathway
    103427770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103427770
   03036 Chromosome and associated proteins [BR:mdm03036]
    103427770
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103427770
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    103427770
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     103427770
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     103427770
   FA (Fanconi anemia) pathway
    Downstream FA components
     103427770
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA-2_helical BRCA2
Other DBs
NCBI-GeneID: 103427770
NCBI-ProteinID: XP_008364394
LinkDB
Position
01:join(713366..713729,713928..715220,715311..715435,715519..715673,716069..716191,716289..716474,716543..716624,716725..716775,716868..716943,717019..717130,717223..717294,718702..718897,718973..719155,719346..719488,719566..719628,719748..719958,720307..720474,720562..720615)
AA seq 1218 aa
MSNRTLPLQKSRSLNMATWHMCSDAGNNYRWYPDPKPEVINGVVYRPSESDRSSSSRVPS
MGDVLLQGCSKLAEAEIRNQVVEGGGVGMFRNGFGKPVAVKQSSLAKASSLLLGSQIATP
SGQVQATIMNNRSGCGGGGAGGGGGCVGGLSNSLFHTGSGKMVNISPDSLVRAKTLLGFQ
DDDNAPTKIVGFGFNSAALVAGTPLIMNKTVSLQTRFQNDPERLNLTPDKVKPSSIKFHT
AGGRSISVSTDAIQRARSLLGDPELGNFFNEANAGDLGFAFSKGSPHDNRTPISHQKKIN
NFLTNTSPSPLQPLPNQLRSSAISSGTNLITQFDGVSNETASRSNSKLAYRQNPLSKTHN
TVENNCWANGIDLRTNHVGMPPATPLFDISNAVGTPATNNTQMTGLKRRLGRSSISPFKA
SPSPLQPLSNQLWSSTISSGTNLITQFDGVSNETASRSNSELPYRQNPLSRTHNTVENNC
LANGIGLRTNHAGKPPAKPLVDISNTVGTTAMNTKQITGVKRRLGRSSISPFKKPRTNSS
TPLPRNVPLVPNGVSTLSSDHSCSKRRVSTRYPSPVTRMYVKKYFGMPRPDQNMLECLSD
PVRRITATNAEKYTFLDESGLNCIGAEAFVHMLACYGASMQYTSREWVTNHYKWVVWKLA
CYERYYPAKSFGKFLTVSNVLEELKYRYEREVNHGHRSAIKKILEGDASPSSPVVLCISA
ICSNCDPNMETSSGAENSSAAKVELTDGWYSVDAVLDALLSKQLASGKLFVGQKLRIWGA
ALSGWAGPVSPLEVSRQVSLRLHINGTYRAHWADQLGFCKGVCAPLAFKCAKSGGGPVPC
TLVGVKRIYPVLYKERLSNGRSIVRSERLETQMVESHQQRRSNVIEGVISEFQRGLEHSH
LCNDSDDEGAKLLKILQTAAEPEILMAEMSAEQLKSFTKYQAKLEAIKQSDMEKSILKAL
EDAGLSEREVTPFMRVRVVGLTRKLYQGKDCSKEGLITIWNPSEKQNSELVEGCAYSISG
LIPTSSDGDILKLLARGSTTKWQPLSQQAINYFEPFFSPRESVLLSDLGKVPLSSEFDIA
ASVVFVGEAYIAAQQKKQWVFVTDGSKSELKSEGLCDSLLAICFSSPYIDNVSNAPINYN
LTGSTVGFCNLTKREKDEMNCLWVAEATENSAYFLTFDNPRCSHLKDAAASSERWKRMSI
LTINRLKERVLFIIGASK
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgagtaatcgtaccctccctctccagaaaagtcgatccctgaacatggcgacatggcac
atgtgctcggatgccggcaacaattaccggtggtacccggaccccaaacccgaagtcata
aacggtgtcgtttatcgtcctagtgagagtgataggagcagcagcagccgggtgccgtcc
atgggggatgtgttgctgcaaggatgttctaagctggcggaggctgagattcgaaatcag
gttgttgagggaggtggcgttgggatgttccgcaacggattcggaaagcccgtcgccgtc
aaacaatcttcattagccaaagcatcttcgttgcttcttggctcccaaatcgcaacaccc
tcaggccaagtgcaagctacgattatgaataacagaagtggatgtggaggcggaggtgca
ggtggaggcggaggatgtgtaggtggtttatctaattcccttttccacactggatccggt
aaaatggttaatatatcccccgacagtcttgtcagggcgaagacattgcttggattccaa
gacgatgacaatgctcccaccaagattgtgggttttggttttaacagtgctgccctggtt
gcagggactcctttaattatgaataagactgtttcactgcaaactagatttcagaatgat
cctgaaaggcttaatttaactcctgataaagttaaaccttcatcaatcaagttccataca
gcaggaggtagatctatatctgtttctactgatgcaatacaacgtgcaaggagtctactt
ggtgacccagagttgggaaatttcttcaatgaggccaatgcaggtgacttgggtttcgca
ttttctaaaggtagtccacatgataaccgcactcccatttcccaccagaagaagattaac
aactttttaaccaatacttctccatctccactgcaaccattgcctaatcaattgcggtcg
tctgctataagttcgggtactaacctgattactcaattcgatggtgttagcaatgaaact
gcttctaggtcaaacagtaagttagcttatcggcagaatccccttagcaagacccacaat
acagtagaaaacaattgttgggcaaatggtattgatttgaggactaatcatgttggaatg
ccaccagccacgccattgtttgatatttcaaatgctgttggcacaccagctacgaataat
acacagatgactggtttaaagaggaggttgggaagaagttctatttctccattcaaggct
tctccatctccactgcaaccattgtctaatcaattgtggtcgtcaactataagttcgggt
actaacctcattacccaattcgatggtgttagcaatgaaactgcttctaggtcaaacagt
gagttaccttatcggcagaatccccttagcaggacccacaatacagtagaaaacaattgt
ttggcaaatggtattggtttgaggactaatcatgctggaaagccgccagccaagccattg
gttgatatttcaaatactgttggcaccactgctatgaatactaaacagatcactggtgta
aagaggaggttgggaagaagttctatttctccattcaagaagcctcgcacaaactcctcc
actccattgcctaggaatgttccccttgttcctaatggtgtgtctacattgtcctctgat
cattcatgttccaaaagaagggtttctacacgatatccttcacccgtgactagaatgtat
gtgaagaaatactttggaatgccgcgacctgaccagaacatgttggagtgtttatcagat
ccagtgagaagaatcaccgcaactaatgcggaaaagtatacgtttcttgatgagtctggc
ttaaactgcataggagcagaagcttttgtccacatgctggcctgttatggagcttcaatg
caatatacctccagagagtgggtcacaaatcattacaagtgggttgtctggaaactggct
tgctatgagagatattatccagctaaatcgtttggaaaattcttgacagtctccaatgta
ctcgaggaattgaagtatagatatgaaagagaagtgaatcatggtcaccggtctgcaatt
aagaagattctggaaggagatgcatcaccttcttcaccggtggttctatgcatttcagct
atttgctcaaattgtgacccaaatatggagactagctctggagctgaaaatagtagtgct
gcgaaagtcgagcttactgatggttggtattcagtggatgctgttctcgatgcactcctg
tcaaagcagcttgctagcggaaaattgtttgttggacagaagcttcggatctggggagca
gcactcagtggctgggctgggcctgtttcacccctcgaggtttcaagacaagtctcttta
cggctgcacataaacggaacatatagagctcattgggctgatcaattgggattttgtaaa
ggtgtttgtgctcccttagcatttaagtgtgccaagagtggtggaggtccagtcccttgc
actcttgtaggagtcaaacggatataccctgttctttacaaggagaggttaagtaatgga
agatctattgtaagatctgagaggttggagacccaaatggtggaatcacaccaacagagg
cgctctaatgttatagaaggcgttatctctgagttccaaagaggattagaacattcgcat
ttgtgtaatgatagcgatgatgaaggagcaaaactcttgaagatactacagacagcagct
gaacctgaaattttaatggcagaaatgagtgcagaacagttgaaatcttttaccaaatat
caagcaaagctagaggccatcaaacagtcggacatggagaaatcaattctgaaagcactg
gaagatgccggcttaagtgagagggaagtcacgccattcatgagagtgagggtggttgga
ctaacaagaaaattataccaagggaaagactgttccaaagaaggcttaataacaatctgg
aacccatctgagaaacagaactctgagctggtcgagggatgtgcatatagcatttctgga
cttataccaacaagttctgatggagatattttaaaattgctggcaagaggatcaacaaca
aaatggcagcctttatctcagcaggcaataaactacttcgagccatttttcagtcctcgc
gaatcagtcttattgtcagatttgggtaaagttcctctctccagcgaatttgatattgct
gcatccgttgtgtttgtgggagaggcttatatagctgctcagcagaagaaacagtgggtg
tttgtaacagacggctccaaatctgaattaaagtcggaaggattatgtgattctctactt
gcaatctgcttctcttcaccatacattgacaatgtttcaaatgctcctataaactataac
ctcacaggatctacggttgggttttgtaatctgaccaagagagaaaaggatgaaatgaat
tgcctttgggtagctgaagctacagaaaattcagcttactttttaacttttgacaatcca
cgttgttctcatctcaaagatgctgctgcctctagtgaaagatggaaaaggatgtctatc
ctgactatcaataggctaaaggagagggttctatttattattggggcaagtaaatga

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