Malus domestica (apple): 103427843
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Entry
103427843 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103427843
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103427843
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
103427843
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103427843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
Chorismate_bind
6PF2K
AAA_17
SRP54
Motif
Other DBs
NCBI-GeneID:
103427843
NCBI-ProteinID:
XP_008364149
LinkDB
All DBs
Position
05:join(44043889..44044051,44044162..44044925,44045054..44045242,44045337..44045445,44045526..44045584,44045658..44046153,44046234..44046343)
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AA seq
629 aa
AA seq
DB search
MASAKREAPPSEDQPQEALKKARVAGDNVSSCNSSSEPLNRKQRVALNRADCALDFVIEG
NERRGYALCDQGFAYCWSGARANVGINGGKYCFGCKIVSYQSVDMEDTKLDQQHLCRLGI
SRGDDAVGSLGETAFGFGYGGTGKFSYHSKFSDYGEKFGLGDTIACAVDLEDKSLASIGF
YKNGKWLGRATFFEVKVLGVSGVDTAAGKMEWESGFFPHVLLKNVVVELQFNVEDGLVAE
EGFKPWACALEDGNAVMGPAFSDPRACEVVMMVGLPASGKTTWAEKWAKQHPEKRYIVLG
TNLILDQMKVPGLLRESNYGERFHFLMNRATDIFNVLLSRAATTPRNYIIDQTNVYKSAR
KRKLKPFAFFRKIAVVVFPSPEVLSVRSEKRMEEMGKELPAEAVNNMLANFVLPVSKDMR
GSDEYFDEAMFVELNREESQRYLDEMKRSLASIDSNTYSVGSSVPTFSPNYGQSLVLPIP
PPAPRMTVVRPYPIVSPSPRAVNPSGTYSGYSGSYSGVPRGGTDHYQSYGRPGAPTNPYG
SSTSGAYPVGSATTSFTGNAYGHLGGAGDPRSAAPWAPIAPTFLPNPSPPAHGGLPYGTP
APGPQYGHLPPVNTPYHGGHYPPTPGYYH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcgaaacgcgaagctcctcccagtgaagaccaaccccaggaggccctgaag
aaggccagggtcgccggcgataacgtttcgtcctgcaactcgtcttcagaacccctaaac
cggaagcagcgtgtagcgctcaatcgcgccgactgtgccctagattttgtaatcgagggc
aatgagcgtcgaggatatgcactttgcgatcagggctttgcttattgctggtccggagct
cgagcgaatgtggggattaatggagggaagtactgtttcggctgcaagatcgtgtcttat
cagtcggtggacatggaggatactaagcttgatcagcagcatctatgccgactcggaatt
tcgagaggggatgatgcggttgggagccttggggaaacagctttcggctttgggtatggg
ggcactggaaaattctcgtatcatagcaagttttcggattatggtgagaagtttggtctt
ggcgataccatagcgtgtgctgtcgatctcgaggataaatctcttgcttccattgggttc
tataagaatgggaaatggttgggtcgagcaacgtttttcgaggttaaggttttgggcgtt
tcaggggtggatactgctgcggggaagatggaatgggagtcggggtttttccctcacgtt
ttgttgaaaaatgtggtggtggagctgcagttcaatgttgaagatggacttgttgctgaa
gagggttttaagccttgggcatgtgcacttgaggatggaaatgcagtgatgggacctgct
ttttcagacccgagggcttgtgaagtggttatgatggtgggtttgcctgcatctggaaag
actacttgggcagagaaatgggcgaaacaacatcccgagaagcgttatattgtgcttgga
acaaatttaattctcgatcaaatgaaggtgccagggcttttgcgcgagagcaattatggt
gaacgatttcatttcctgatgaatcgagcaacggatatttttaacgtccttttatccaga
gcagccaccacacctcgcaattacataattgatcagacaaatgtatacaagagtgctcgt
aaacgtaaacttaagccatttgctttcttccggaagattgctgttgtggtgttcccaagc
cccgaagtgctgagtgttcgttccgagaaaagaatggaagaaatgggaaaggagctccct
gctgaagcagtaaataatatgttagccaattttgttttacctgtcagcaaggatatgcgt
ggttcagatgagtacttcgacgaggctatgtttgtagaactcaacagagaagagtcacag
agatatttggatgagatgaagcggtcactcgcaagcattgactctaatacgtattctgtt
ggaagctctgttcctacgttctcaccaaattatgggcaaagtcttgtgctgccaattcct
ccgcctgcacctaggatgactgtggtgcggccatatcctattgtttcgccttctccaagg
gctgttaacccttctggaacttattctggctactcgggcagttacagtggtgttcctagg
ggaggtacagatcattaccagagttatggacgaccaggtgctcccactaacccctacggt
agtagtaccagtggagcttatccagtaggcagtgcaacaacttctttcacaggcaatgcc
tacggacatcttggtggtgctggagatcccagaagtgctgctccctgggctccaatagca
cccacatttcttcccaatccttccccacctgcacatggaggcttaccatatggaactcca
gctcctggtcctcagtacggacatcttcctcctgttaacactccatatcatggaggccat
taccctcctacgccggggtactaccactga
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