Malus domestica (apple): 103428408
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Entry
103428408 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103428408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103428408
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103428408
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103428408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
103428408
NCBI-ProteinID:
XP_028960971
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All DBs
Position
07:join(3085729..3085938,3086804..3087190,3087526..3087846)
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AA seq
305 aa
AA seq
DB search
MASSSPFFDDIRTKSEVIDPPQSEDMLDVGESVDDATEMPQKPNVTVSSSVRELLECPVC
LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCMGIYPYYSKLKHESQCLHRPYNCPYAGSECSIVGDIPHLVAHLKDDHKVDMHNGSTFN
HRYVKSNPQEVENATWMLTVFSCFNQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagtagtccattttttgatgacatccggaccaaatctgaggttattgatcct
cctcaaagtgaggacatgctggatgttggagaaagtgtcgatgatgctactgaaatgccc
caaaaacctaatgtgacagtttctagcagtgttcgcgagctgctggagtgccctgtgtgc
ttaaatgctatgtaccccccaatccatcagtgttcgaatggtcacacattatgttctggt
tgcaaaccaagggttcacaaccggtgccccacttgccggcatgagcttggtaatatcaga
tgtcttgcgttggagaaggtggctgcttctctggaacttccatgtaaataccagagtttt
ggttgcatgggcatatacccttattacagcaagctaaagcatgaatctcagtgtctccat
agaccctacaactgcccctatgctggttctgaatgctccatcgttggagatattcctcat
cttgtggcccatttaaaagatgatcacaaagtcgacatgcacaatggcagcactttcaac
catcgctatgtaaaatcaaatccacaagaagttgaaaacgccacttggatgttaacggtt
tttagttgcttcaatcagtatttttgcctacattttgaagctttccagctcgggatggct
cctgtctacatagcattcttgcggttcatgggtgatgataacgaggcaaagaactacagc
tacagtctagaagtaggtgggaacgggaggaagatgatttggcagggggtgccgcgtagc
attagggatagccatcgcaaggttcgtgacagttttgatggtctcattattcaacgcaac
atggccctcttcttctcagggggagaccgaaaggaattgaagcttagggtgaccggaagg
atatggaaggaacagtga
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