Malus domestica (apple): 103428625
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Entry
103428625 CDS
T03194
Name
(RefSeq) amino acid transporter AVT1C isoform X2
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
mdm
Malus domestica (apple)
Pathway
mdm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103428625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdm02000
]
103428625
Transporters [BR:
mdm02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
103428625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
103428625
NCBI-ProteinID:
XP_028961645
LinkDB
All DBs
Position
07:join(24833188..24833372,24833948..24834270,24835108..24835322,24835558..24835581,24836650..24836830,24837007..24837226,24837393..24837528,24837672..24837691,24837957..24838096,24838254..24838297,24838448..24838510,24838681..24838785)
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AA seq
551 aa
AA seq
DB search
MNNSVSDRSFYIESEEEDDEEKEFNKSIEDGGESDSSAESLTENRQPNNPSSHNNQWPQS
YRQSIDLYGSVPSPSIGFLGTPSLSRLGSSFLSSSLTRRYTPETLPFLSKPLPTVADEQQ
HQQQRRSSHSLLPPLPRRSSVRKDEKASRVTHDHHPMPRHSSFAQAVINGINVLCGVGIL
STPYAVKEGGWLGLFVLLIFAVLSFYTGLLLRYCLDSQPGLETYPDIGQAAFGTGGRIAI
SIILYVELYACCIEYIILESDNLSSLFPNAQLSLGGFVLDAHLLFAIVTTLAVLPTVWLR
DLSVLSYISAGGVIASILVVLCLLWVGLVDGVGFESKGTPLNLATLPVAMGLYGYCYSGH
AVFPNIYTSLENRSQYPAILLTCFCICTLMYGGVAVMGYTMFGELTQSQFTLNMPHDLVA
TKIALWTTVVNPFTKYALTISPVAMSLEELVPSNKSHVYAILIRTALVVSTLVVGLCIPF
FGLVMSLIGSLFTMLVTLILPCACYLSILRGRITRFQGTLCIIIIMVGVVSSAFGTFSAI
SKIVESLRSPT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcggtttccgatcggagtttttacattgagagtgaggaagaagatgatgag
gaaaaggaattcaataagagcattgaagacggaggcgaatcggattcttctgccgaatct
ttaactgagaatcggcagccgaataatcccagttctcacaacaatcaatggcctcaaagt
tacaggcaatccattgatctctatggtagtgttccatcccctagtattgggtttctgggc
actccttcattgtcaagactaggaagttcatttctttcctcatccctaacaagaaggtac
actcccgaaacattacctttcttgtcaaaaccattaccaacggtcgcagatgagcaacaa
caccagcagcagaggcgcagttctcattctctgcttcctcctctgccaaggaggtcatcg
gttagaaaagatgagaaagcatccagggttactcatgaccatcatccgatgcctcgccac
agctcatttgcacaagccgtgatcaatggaattaacgttctttgcggggttgggatcctt
tcgacaccatacgcggtcaaagaagggggatggcttgggctcttcgtgttacttattttt
gcagtgctttcattctacacaggattgctcctgcgttactgcttggatagccaacctggg
cttgagacttacccagatattggccaagctgcatttggtactggaggcagaatcgccatc
tcgataatactgtacgtggaattatatgcttgttgcatagaatatataattttggagagt
gataacttgtcttcactatttccaaatgcgcaactaagtttgggcggattcgtgttagat
gctcaccttttgtttgcgattgtgaccacccttgctgttcttcctactgtatggcttcga
gacctcagcgttcttagctatatctcagcgggtggagtcattgcatcgatcttggtcgtc
ctttgcctcctttgggttggtctagtagatggagttggctttgagagcaaaggaacacca
ctgaaccttgcaacccttcctgttgctatgggtctctacggttactgctactcaggacat
gctgttttcccaaacatttatacttcattggaaaaccgaagccaataccctgcaatcctc
ttaacctgtttttgtatttgcactttaatgtacggtggagttgctgtcatgggttacacg
atgtttggagaattaacacagtcgcagttcactctcaacatgcctcacgatttagttgcg
accaagattgctctatggactacggtggtcaacccctttacaaaatatgcgttaactata
tctcccgttgcaatgagtctggaggagctggtaccatcaaacaagtctcacgtatacgca
atcttaattagaacggcactggttgtctctaccctggttgtcggtctctgcatccccttc
tttggtctcgtgatgtcgctgattggatctttatttacaatgcttgtaacattgatactt
ccatgtgcttgttatctgagcatcttgaggggacgcataactcgatttcagggaacactt
tgtattataattataatggtaggcgttgtatcatccgcgttcgggacattttcggccatt
tcgaaaattgttgagagcttgagaagccctacatag
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