Malus domestica (apple): 103428628
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Entry
103428628 CDS
T03194
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103428628
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103428628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
103428628
NCBI-ProteinID:
XP_008364966
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All DBs
Position
10:9748479..9756682
Genome browser
AA seq
710 aa
AA seq
DB search
MSDWDDVFLAPAGVPARAGGRFRPKAKPRPSRVASTAAAPALPIVITEIHVTLSTTVSDS
VPSVDVGDSKLTDQVGSIEPSENNEIPLSDGKKVTGPCESTADVAGSDGKASGENADIFS
GLECLDDSISQTTRGTAEFAVNKSGDKANTGTKPEAETGSDYCTTQDPMSCREVSVSNKQ
GEIEPECQVDGAFSDFEVLDVGSDVAISSERHAGKHQPKLKVKKGKENIHIPCSEVEPNM
GSQAGHLVHFETGDMNESSLPAFPTRHVIDHPSPRLGDSSTLNPTPDSQVNTENLAETNH
SDGAILGDAVHSEDVGGTPEKVGRKSRNRNTSTTSDLPQKRKSSAIEKAEGETSSRQLRK
RVPHKQVDELADEANDDSFTAEPSSDSKINEDEDNIDEYREHETSQRKRAPRKSKKPVSE
KEPVRKRKKTKEASDQSTKDASKKFSHSTRRNRRQVDKSLLEIPEEEFDPYKLSLKDLIR
LAEHKELLKIKEARKLTTRQPNESTNSDSHKEGSHNEEFYPSEHGTDENQATYHVNSSLL
NYQTYMDKAPTARWSKQDTELFYEAIQQCGSDFTMIQELYFPGRTRHQVKLKFKKEERQH
PLRISEAVLSRSTHSTDHSQFTSYIEKLQQAAQANKESNADESVDMTSKEEGLREQTRDT
DERMEKPESEEVQDQEADVAEVQDQEAVAAEVSNPLKSDEIDEEDFTWSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattgggacgatgtttttcttgcgcctgctggtgtccctgctcgtgctggtggc
cgatttcgacccaaggcaaagccacggcctagcagggtagcatctacagcagccgcccct
gctcttccgattgtcataacagaaatacatgtaacattatctaccactgtctcagatagt
gttccatctgttgatgttggagacagtaaactaacagatcaagttgggagcatagagcca
tcagaaaacaatgagattccattgtctgatggcaagaaggtcactggaccttgcgaatca
actgcagacgttgcaggttctgatggaaaagcatcgggggagaatgcagacatattctct
ggattggaatgtcttgatgattctatcagtcaaacgacaaggggtacagcagagtttgct
gtcaataagtctggtgataaggctaatacgggtaccaaaccagaagctgaaactggttct
gattattgtacaacccaagatccaatgtcctgcagagaagtttccgtttctaacaaacag
ggtgaaatagaacctgagtgtcaggtagatggggctttctctgactttgaagttctagat
gttgggtctgatgtcgccatttcatccgaacgacatgctggcaaacatcaacccaagctc
aaagtgaaaaaaggaaaggagaatattcatatcccttgctctgaagttgagcctaacatg
ggttcacaagctggacatttggtacattttgaaactggtgacatgaatgagagctcgctt
cctgccttccctactagacatgtcattgatcacccgtctccaaggcttggtgattctagt
accctgaatccaacccctgattcccaagtgaatacagaaaacctggctgaaactaaccac
tcggatggtgccattttgggggatgctgtgcattcagaagatgttggtggaacacctgaa
aaagtgggtcgtaagagtagaaatagaaacacttctactacatcagatcttcctcagaag
cgcaaatcttctgcaatcgagaaggctgaaggtgagacatcatccaggcagctgaggaag
cgggtacctcataaacaagttgatgagctggcagacgaggctaatgatgacagcttcact
gctgaaccttctagtgattctaagatcaatgaagatgaggataatattgatgaatatagg
gagcatgagacatcgcagaggaaaagagcccccagaaagtccaagaaaccagtatctgaa
aaagaaccagttcgaaagcgtaagaagaccaaggaagcatctgatcagtcaaccaaagac
gcttccaaaaagttctcccattcaactcgtagaaacagaagacaagtggacaagtctttg
cttgaaatcccagaggaggaatttgacccctataaattatctctcaaggatctcattcgt
ctagcagagcataaggagctgttaaagattaaggaggcaagaaaattgacaactcgacag
cccaatgaaagtacgaacagtgattctcacaaggaaggttctcacaatgaagagttctat
ccttcagaacatggcactgatgaaaaccaagcaacttatcatgttaattcctctctcctc
aattaccaaacttacatggacaaagcacccactgcaagatggtctaagcaggacacagaa
ctgttctatgaggctattcagcagtgtggatcagattttactatgattcaagaactttat
tttcctggtcgaacgcgtcatcaagtcaagttaaaattcaagaaggaagagcgtcaacat
ccattacgcatctcagaagccgtactaagtcgctcgactcattccacagatcattcgcaa
tttacttcatatattgagaagctgcaacaagctgctcaggcaaacaaggaatctaatgca
gatgagtcagttgacatgacaagcaaggaggaaggactaagagagcagactcgggatacc
gatgagcgaatggagaaacccgagtcggaagaagttcaagatcaggaagctgatgttgct
gaagttcaagatcaagaagctgttgctgctgaagttagcaatcccttgaagtccgatgaa
attgatgaagaagattttacatggtctgactga
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