KEGG   Malus domestica (apple): 103429844
Entry
103429844         CDS       T03194                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103429844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103429844
   03041 Spliceosome [BR:mdm03041]
    103429844
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103429844
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103429844
Spliceosome [BR:mdm03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103429844
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB RRM_RdRP1_2 Ntox35 BRAP2 PHM7_cyt
Other DBs
NCBI-GeneID: 103429844
NCBI-ProteinID: XP_008366190
LinkDB
Position
11:complement(join(3051539..3052066,3052338..3052507,3052643..3052742,3052875..3053038,3053428..3053468,3053716..3053771))
AA seq 352 aa
MGSKSNPGHPHSGDGASPGKIFIGGLAKDTTYATFTKHFGKYGEIVDSVIMKDRFTGTPR
GFGFITYADPSVVDTVIEETHVINGKEVEIKRTIPKGQGQSKDFRTKKIFVGGIPSSVSE
DELKSFFSEYGKVVEHQIIRDHETNRSRGFGFVIFDNEEVVDELLSKGNMIDMAGTQVEI
KKAEPKKASNPPSAPAYGSNSRARSFNDGFGGYGSSYGGFDGGFGPGPYRTPGGLGGRYG
GGYGYGYGSDSGEFGSGYGSFGSSSLGGYRGESSLGYSSRFGPYGGGYGGGYGASGLGGY
GRGGEGYGSYGGSNYGGGGYDSYPGATYGGGAGGPYGRGGYNSSSRYHPYGR
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgggttcgaagtcgaatcccggccatcctcactcaggcgacggcgccagccccggaaag
atcttcattggtggattagcaaaagacactacatatgctacgtttaccaagcactttggg
aaatatggagagatagtggactcagtgataatgaaagatcgcttcaccggtacccctagg
ggctttgggtttataacctacgccgatccatcagttgttgatacagttattgaggaaact
catgttatcaatggaaaggaggttgagatcaagagaaccattccgaaaggtcaagggcaa
tcaaaggattttaggacaaagaagatatttgtgggtggcattccatcatccgtctctgag
gatgagttgaaaagtttcttctctgagtatgggaaagtggtagaacaccagatcatacga
gatcatgagaccaatcggtctcgaggctttgggtttgtaatttttgacaatgaggaagtt
gtagatgaattgttatctaaaggaaacatgattgatatggcgggtacccaggtggagatc
aagaaagctgaaccaaagaaagcctcaaatccaccatctgctcctgcatatggtagcaat
tctagggctcgttcttttaatgatggctttggtggatatggcagttcttatggtggtttt
gatggagggtttggccctggaccctataggacaccaggtggtcttggtggtagatatggt
ggtggttatggctacggttatggtagcgatagtggcgaatttggcagtggttatggtagt
tttggcagcagtagcttaggtggctatcgtggtgagtcttctcttggttattctagccgc
tttggaccatacggtggtggttatggtgggggctatggtgcaagtggtttaggtggttat
ggccgtggtggtgaaggctatggaagttacggaggttcaaactatggtggtggtggctat
gactcttatcctggtgctacttatggtggaggagcaggtggaccatatggaaggggggga
tataatagcagtagtcggtaccacccctatggaaggtag

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