KEGG T03194: 103430037

Malus domestica (apple): 103430037

Entry

103430037         CDS       T03194

Name

(RefSeq) double-strand break repair protein MRE11 isoform X2

K10865

double-strand break repair protein MRE11

Organism

mdm Malus domestica (apple)

Pathway

mdm03440

Homologous recombination

mdm03450

Non-homologous end-joining

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103430037
   03450 Non-homologous end-joining
    103430037
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103430037
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103430037
DNA replication proteins [BR:mdm03032]
Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    103430037
DNA repair and recombination proteins [BR:mdm03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     103430037
    BRCA1-C complex
     103430037
   NHEJ (non-homologous end-joining)
    MRX complex
     103430037

SSDB

Motif

Pfam:

Mre11_DNA_bind Metallophos

Other DBs

NCBI-GeneID:

103430037

NCBI-ProteinID:

XP_008366397

LinkDB

Position

03:join(29459556..29459633,29459838..29459995,29460273..29460363,29461048..29461167,29461278..29461346,29461431..29461522,29461660..29461762,29461930..29462037,29462142..29462204,29462279..29462350,29462474..29462551,29462747..29462809,29462900..29462960,29463389..29463471,29463868..29463981,29464071..29464148,29464560..29464631,29464756..29464997,29465625..29465742,29466005..29466202,29466331..29466363)

AA seq 697 aa
MEKDEIRRHDSFQAFDEICSIAERKNVDFLLLGGDLFHENKPSRSTLVKVIEILRRHCLN
DQPVQFQVVSDQTMNFPNTFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA
CNLVNYFGKMGLGGSGVGQITVYPILMRKGATSVALYGLGNIRDERLNRMFQTPHAVQWM
RPESQEGLEVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVVWGHEHECLVDPQEVP
GMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYTEIVLKDE
PEIDPNDPNSILEHLDKVVNSLIEKSRKNVVSGSPIQLPLVRIKVDYSGFMTINPQRFGQ
KYVGKVANPQDILIFSKASTKGRSEAKIDDSERLRPEELNQQNIEALVAENNLKMEILPV
NDLDVALHNFVSKDDKMAFYSCVKYNLEETQKKIAKDPDNVTFEEEDLIVKVGECLQERV
KERPTQSKKNSPFSSTAPPWEDFRGTSAAGTASAVSFSDDEDAMQMTGSTSTARGRNGRM
STSEVGKGKTTRRGRGRGRGRGTSTLKQLTLDASLGFRHSQRSASVAATAAVQSIADDGD
DVDSPNEGSGKLGIDEVDNSSENDEILPPSRGRKRAAPRGRGRGSTQPSKRGKKSDSSAV
NRMFMNKDDDDDDDDDVTKRVNKPLPQVTRNYGSLRR

NT seq 2094 nt +upstreamnt +downstreamnt
atggagaaggatgaaatacggcggcatgattcattccaggcatttgatgagatatgctca
atagcggaacgaaaaaatgtggattttttgcttcttggtggtgatctgttccatgagaat
aagccttcaaggtcaacactagttaaggtcattgagattctccgtcgtcattgcctcaat
gatcagccagtgcagttccaagttgttagtgaccagactatgaattttccaaatacattt
ggtcatgtaaattatgaagatcctcacttcaatgttggattgccagtatttagtattcat
ggaaatcatgacgaccctgctggagtggataatctttctgctgtcgatattctctcagcg
tgcaaccttgtaaactattttgggaaaatgggtcttgggggttctggtgttggtcagatc
actgtgtatcctattctcatgaggaagggtgcaacatcagtggctctctatggtctcgga
aatattagagatgagcggctcaatagaatgtttcagacaccacatgctgtacaatggatg
agacctgaatctcaagaagggttggaagtatcagactggttcaacattctagtgcttcat
cagaacagagtgaagacaaatccaaaaaatgccataaatgagcactttttaccacgcttc
ctagacttcgtagtgtgggggcatgaacatgaatgccttgtggatcctcaggaagttcca
gggatgggatttcacattacacaacctggttcttcagttgcaacatcactgatcgatgga
gaatcaaagccaaagcatgtgctccttttagaaattaaggggaatcaataccgtccaacc
aagattcctttgacgtctgtgaggccgtttgagtacacagagattgtattaaaagatgaa
cctgaaattgatcccaatgatccaaactcaattcttgaacacttggacaaagtggtcaac
tctctgatagagaaatctaggaaaaatgttgttagcggatcaccgatccaacttccattg
gtccgaataaaggtggactattctggatttatgacaataaatcctcaaagatttgggcag
aagtatgtggggaaggttgcaaacccacaagacattcttatattttccaaggcttcaaca
aagggccggagtgaagctaaaattgatgattctgaacggcttcgcccggaagaactaaat
cagcaaaacatagaggctttggttgctgaaaataatctgaaaatggagatccttcctgtc
aatgatttggacgttgcattacacaattttgttagtaaggatgacaaaatggctttttat
tcttgcgtgaaatacaatcttgaagaaactcaaaagaaaattgctaaggatccagataat
gtaacatttgaagaggaagatttaatcgttaaagtcggagagtgtttgcaggaacgtgtc
aaggaaaggcctacgcagtctaagaaaaactctccattctcctccactgcccctccttgg
gaggatttcagaggtacaagtgctgctggaactgcaagtgcagtttccttcagtgacgat
gaagatgcaatgcagatgactggctccacatcaactgccagaggccgcaacggcaggatg
tctacctcagaagttggtaagggtaaaactacaagaagaggaagaggaaggggcaggggc
aggggcaccagtaccttgaagcagttgactctcgatgcatctcttggatttcggcattct
cagagatctgcatcagttgctgcaactgccgctgttcaaagtattgcggatgatggagat
gatgtggattctccaaatgaagggtcggggaaacttggaattgatgaggttgacaacagt
tcggaaaatgatgaaattcttccaccaagtagaggacggaaaagggctgctccaaggggg
agaggtagaggctctacacaaccatctaaacgtggaaagaaatcagatagctctgcagtt
aaccgaatgtttatgaacaaagatgatgatgatgatgatgatgacgatgtgacaaagaga
gtaaacaagcctctgcctcaggtcacgagaaattatggctctcttagaaggtaa

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