Malus domestica (apple): 103430099
Help
Entry
103430099 CDS
T03194
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103430099
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103430099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103430099
NCBI-ProteinID:
XP_008366452
LinkDB
All DBs
Position
11:complement(join(28593194..28593457,28594113..28594625,28595969..28596280,28596392..28596451))
Genome browser
AA seq
382 aa
AA seq
DB search
MIFNVKKYGGVADGKTDNSKAFIDAWTQACQNNGGGVVLFPAGKYLVKPVVFTGGCKGPM
VVQIKGTLLAPVEVKSSIDINHWITFQYVDNLVINGGGSLDGQGPSAWPYNNCMNDPHCK
RLPTTLRLDFVTNSKIHDITSINSKNVHINLFASHDITIQNITISAPGDSPNTDGIHIGT
SHHIEILDSVIATGDDCISFSSGSNNIKISGVHCGPGHGISIGSLGKGAGDDVSFVDIRN
CTFVGTTNGVRVKTWAPSQPGTVSHLTVEYVRVDKVDNPIIIDQQYCPSRSCSTTESSRV
QIQDVKFSNIWGSSTTQSAITLKCSQTNPCQKIEMRDINLRYNGPEGSAHSACTNADVVT
YGQQQPLPCTEKIELLYPSIFD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaacgtgaagaaatacggaggcgttgctgatggcaaaacggataacagcaag
gctttcattgatgcatggactcaagcctgtcaaaacaatggaggtggtgtggttttattc
ccagcagggaaatacttggtgaagccagtggttttcacaggtggatgcaaggggccaatg
gtggtgcagataaagggaaccctactggctcccgtggaggtgaaatcttcgattgatatt
aaccattggattaccttccaatacgttgacaacttggtaatcaatggtggtggttcgttg
gatggacaaggtccctctgcttggccttataacaactgcatgaacgatccacattgcaag
cgacttcctaccaccttgagattggatttcgtcacaaattcaaagatccatgacataaca
tcgatcaatagcaagaatgtccacatcaacctttttgcgagccatgacataacgattcaa
aacatcaccatatcagctcccggtgacagccctaacaccgacggaatccacattggcaca
tcacaccacatcgaaatcttggattcagtgatcgccaccggggacgattgcatatccttc
agttccggatcaaacaacataaaaatcagcggcgttcactgcggtccgggccacggaatt
agcatcggaagccttggcaagggtgctggtgacgatgtgtcattcgtggacataagaaac
tgcaccttcgttggtactacaaatggagtgagagtcaagacatgggctccctcccaacca
ggcactgtttcacatcttaccgttgagtacgttcgagtcgataaggtcgataaccccatc
atcatcgatcaacaatattgtccttcacgtagttgcagtacaacggaatcctcgagggta
cagattcaagatgttaagttcagtaatatatggggtagttcaaccacacagagtgctatt
acattgaaatgtagccaaactaacccctgccagaagattgagatgagggacatcaaccta
cgttacaacggtcctgaaggatcagctcactcggcatgcacaaacgcagatgttgtaact
tatggccaacaacaaccacttccttgcacagaaaagatagagctattatacccctcaata
tttgattaa
DBGET
integrated database retrieval system
