KEGG   Malus domestica (apple): 103430250
Entry
103430250         CDS       T03194                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103430250
   03036 Chromosome and associated proteins [BR:mdm03036]
    103430250
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     103430250
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     103430250
    SLIK complex
     103430250
SSDB
Motif
Pfam: SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C ResIII HDA2-3 DEAD Chromo_MIT1 COG4_m SWI2_SNF2
Other DBs
NCBI-GeneID: 103430250
NCBI-ProteinID: XP_028944516
LinkDB
Position
11:complement(join(25094321..25094763,25095006..25095099,25095218..25095568,25095936..25096117,25096215..25096392,25096527..25096682,25098139..25098375,25098462..25098542,25098807..25098986,25099252..25099338,25099493..25099603,25099724..25099966,25100561..25100773,25101669..25101732,25101826..25101950,25102073..25102166,25103414..25103481,25103565..25103756,25103836..25103970,25104659..25104746,25104851..25104944,25106361..25106424,25106601..25106652,25106900..25107003,25107093..25107152,25108411..25108494,25108657..25108881,25111174..25111587,25112045..25112112,25112265..25113003))
AA seq 1741 aa
MAFFRNYSKDTVSRSVLEEKTQGKSVERIHSSTGNDDVDVKSCEKEFDINMDVQYQSEGE
HDDASRLHNEVATDEGMGTRVSNLPSSGRRTTVAGKWGSTFWKDCQPMHSQGGSDSGQET
KSGSDHRNAVGSEDNSSDVGEDRIDFEDDGRPKVSKGQRGHSDIPADEMLSDEYYEQDGE
EQSESMHYRGFHHSVGSNSRPQLKPNSVSNHAHHRTSRNDIEDFEDGDDANEDLDAADAD
YEEDEDEDDPDDADFEPDYGVGSGRTAQKDKNWNGEDSDEDNDSDDELDVSDEDDSYYGK
KPKSRHQGDAKSTRERKSYHSSSRQRRGKSSFDDDESSAEDSESDGDEDFKGIKRKGVHT
RKSNGRRNVLGQNGEVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEIEEEDGDYIEK
VLWHQPKGMAEDALRNNRSTDPILLSHLFDSEPDWNHMEFLIKWKGQSHLHCQWKSISEL
QNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQVERIIADRIR
QDSSGDVGPEYLVKWQGLSYAEATWEKDVDIGFAQDAIDEFKAREAAMAVQGKMVDLQRK
RSKGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQINGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFNNDK
IVGRPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSSIKDGSKLERIILSSGKLVILDKLLMKLHETKHRVLIFS
QMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKESKKGTLFDKNELSAILRFGAEELFKEDKNDEESKKGLLSMD
IDEILERAEKVEEKETAEEGNELLSAFKVANFGTGEDDGSFWSRWIKPEAVSQAEEALAP
RATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKSDYTVTSAPMIGGASAQVRRWSS
GNLSKRDALRFSRAVMKFGNESQIASIVGEVGGAVAAASTEAQVELFNALIDGCTEAVEV
GSLDSKGPMLDFFGVPVKAGDLLNRVRELQHLAKRISRYDDPIAQFRVLMYLKPSNWSKG
CGWNQIDDARLLIGIYYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLRDRA
NALLEMEIAALGGKNANAKVGRKSSKDRETTVNVSLARSGLKKGKTGSSRVNVQMNKDRP
LKPQKVEALVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLKRLQRLQTTSANLP
KEKVLSKIRSYLQLLGRTIDQIVLENEEEPYGQDRMTMRLWKYVSTFSNLSGERLHQIYS
KLKQHQDVEAGPSHMNDSASGPFGRDSDPSPFSFPSDRQRGHDTAKFEAWKRRRRGEADS
NFQVQAPSQRNMNNGTRLTDPSSLGILGARPSENKRTVNERPYRTRQAGLPTKQGFTSRI
K
NT seq 5226 nt   +upstreamnt  +downstreamnt
atggctttttttaggaactattctaaagacactgtttcacgaagtgtcctcgaagaaaag
acccagggaaaaagtgttgaaagaattcacagttctacagggaatgatgatgtggatgta
aaatcttgtgaaaaggaatttgatatcaacatggatgtgcagtatcaaagtgaaggtgaa
catgatgatgctagtaggttgcacaatgaggtagcaacagatgagggtatgggtacaaga
gtttccaatttgccctcttctgggaggaggacaactgtggctggaaagtggggttcgacc
ttttggaaggactgtcagcctatgcactcacagggcgggtctgattctggtcaggaaact
aaaagtgggtcggaccacagaaatgctgttggatctgaagataattcttcagatgtcggg
gaagatagaatagattttgaagatgatggcaggccaaaggtaagcaagggacaacggggg
cattctgacatccctgcagatgaaatgttatctgatgaatattatgagcaggatggggaa
gaacagagtgaatcgatgcactatagagggtttcatcattccgttgggtcaaattctagg
ccacaattaaagcctaattcagtcagtaaccatgcacatcatagaacttctagaaatgat
attgaagattttgaagatggtgatgatgccaacgaagatcttgatgctgctgatgctgat
tatgaagaagacgaagatgaagatgatcctgatgatgcagattttgaacctgactatggt
gttgggagtggtcgcactgcacagaaggataaaaattggaatggtgaagattctgatgaa
gacaatgatagtgatgatgagcttgatgtttcagatgaagatgattcttattatggaaag
aaacctaagagtaggcatcaaggtgatgctaaatcgacaagggaacgcaaatcatatcat
tcgtctagtcgccaaagaagagggaagtcatcttttgatgatgatgagtcctcagcggag
gactctgagagtgatggtgacgaggattttaaaggtatcaaaaggaaaggtgtacatacc
cgcaaaagtaacggccgaagaaatgttcttggacaaaatggtgaggtgcgaacttctacg
aggtctgttaggaaggtctcatatgttgaaagtgatggaagcgatgaagtggaagaagga
aagaaaaagaagtcccagaaggaggagattgaagaagaggatggtgactatattgaaaag
gtgctctggcatcagcctaaaggcatggctgaagatgctctcaggaacaatagatcaacg
gatcctatcctattaagtcacttgtttgattctgagccagattggaatcatatggagttc
ttgattaaatggaaagggcagtcccatttgcactgtcagtggaaatcaatttccgagcta
caaaatcttagcggttttaagaaggttttaaattacactaaaaaggtgatggaagatgcc
aggtacaggaacacaatatcacgtgaggagattgaggttcatgatgtgagcaaggaaatg
gacttggatcttatcaagcagaatagtcaggtggagagaataattgcagaccgcatcagg
caagatagctctggtgatgtgggtccggagtatctagtcaagtggcaagggttgtcttat
gctgaagcaacatgggagaaggatgtagatattgggtttgcacaagatgctatcgatgag
ttcaaggctcgtgaagctgcaatggctgtacaagggaaaatggtggatctccagcgcaag
aggagcaaaggaagtctacggaagctcgaggaacagccggaatggttgaagggaggaaag
cttcgtgattatcagcttgagggtttgaattttcttgttaatagttggaggaatgatacc
aatgtcattttagctgatgaaatgggtcttggtaaaactgttcaatcagtttcaatgctt
ggttttttacagaatgctcaacagatcaatgggccgtttcttgttgttgtaccattatcc
actttgtctaactgggccaaagaatttaggaagtggctccctgatatgaatattattgtg
tatgttggtactcgtgcaagccgagaggtttgtcaacagtatgaatttaataatgataaa
atagtaggccggcctataaaatttaacgcactattgacgacatatgaggtggttttaaag
gataaggctgttctttccaagatcaagtggaattatctaatggttgatgaagctcataga
ttaaagaacagtgaggcacagttgtacacaaccctcttggaatttagcacgaagaacaag
ttgcttataactggtactcccttgcagaacagcgtagaggagttatgggctctgcttcac
ttccttgaccctgataagttcaagaataaagatgattttgttcagaattacaagaatctc
agttcattcaatgagattgagcttgctaatctgcatatggaattgaggcctcacattctt
cgaagagttatcaaggatgtggaaaagtctttacctcctaaaattgaacgaattcttagg
gttgaaatgtctcctcttcagaaacagtactataaatggattttggaacgcaactttcat
aacttgaacaaaggagttcgtgggaatcaggtttcgttgttgaatattgtggtagagttg
aagaaatgttgtaatcatccctttctgtttgaaagtgctgaccatggttatggtggggac
tcaagtattaaagatggcagtaaattggagaggattattttaagcagtggaaaattggtt
atacttgataagcttcttatgaaattgcatgaaacaaagcaccgtgttctcatattttcc
cagatggtaagaatgttggacatactggcggagtatatgtcaattagaggttttcaattt
cagcggcttgatgggagtacaaaggccgatttacgccaccaagcaatggaacattttaat
gcgcctggtagtgaagatttttgcttcctcctttcaactcgagccggtggccttggtatc
aaccttgccacagcggatacagtgataatattcgactcagattggaatccccaaaatgac
cttcaggcaatgagcagagcgcacagaatagggcaacaagaagttgttaacatctataga
tttgtcacaagcaaaagtgtcgaggaagatattctggagagagctaagaaaaagatggtg
cttgaccatttggtgattcaaaaattaaatgcagagggtaggttggagaagaaagaatct
aagaaagggactttatttgacaaaaatgagctgtctgctattctacgatttggggctgag
gaacttttcaaggaagacaaaaatgatgaagagagcaagaaaggactcttgagtatggat
attgatgagattcttgaaagagcagaaaaggttgaagagaaggaaactgcagaggaaggg
aatgaattgttgagtgcttttaaggttgcaaattttggtactggtgaagatgatggtagt
ttttggagtcgttggataaagccagaagcagtatcccaagctgaagaagcgcttgctcct
cgtgctacaaggaatactaagagctatgcagaagccgatcagcctgatagaagtaataaa
agaaaaaagaaagaatctgagcctcaggaaagagtccagaaaaggcggaaatcagattat
acagttacctctgctccaatgattggcggagcatctgctcaagttaggagatggtcttct
gggaacttatctaaaagagacgcattgcgattttctcgtgctgttatgaaatttgggaat
gagagccaaattgcctcgatagttggggaggttggtggtgccgttgcagcagcttcaact
gaagcacaggttgagctttttaatgcattgattgatggctgcacagaagcagtggaagtg
gggagtctggactcgaaggggcccatgctggatttttttggtgtccctgtcaaagctggt
gatctgctcaatcgtgttcgtgaacttcagcacctggcaaaacgcattagtcgatatgac
gatcctattgctcagtttcgtgtcttgatgtacctcaaaccttcaaattggtcgaaaggt
tgtggttggaatcaaattgatgacgcaagattgcttattggaatatactaccatggcttt
ggaaattgggaaaagatacgtttagatgaaaggcttggccttacaaagaaaattgctcca
gtggaacttcaacaccatgaaacatttttaccccgtgctccaaatttaagagatcgtgct
aacgctcttttggaaatggaaattgcagcccttggtggaaagaatgcaaatgctaaagtg
ggtcgtaagtcttcaaaggatagggaaactactgtcaatgtttctttggctcgcagtggg
ctaaagaaaggaaaaactggttcttctagagttaatgttcaaatgaacaaggatagacca
ctgaaaccccagaaagttgaagctttagtgaaagaggagggtgaaatgtcggatgatgat
gaagtgtatgagaagttcaaggaggagaaatggatggaatggtgtgaagagatgatgaag
gatgaaactaaaaccttgaaacgtcttcaacggttgcagacgactagtgccaatcttcca
aaggaaaaggtgctttccaagattcgaagttatttacaacttcttggacgaacgatagat
caaattgttttagaaaatgaggaggaaccgtatggacaagataggatgaccatgcgcttg
tggaaatatgtttctaccttttcaaatctgtccggggagagacttcatcaaatatattca
aaacttaaacagcaccaggatgtggaggctggcccttcccacatgaacgactccgcttct
ggtcccttcggcagagacagcgacccttctcccttctccttcccttcggacaggcaaaga
ggtcatgatacagccaagtttgaagcatggaaacggagaaggagaggggaagctgatagt
aatttccaagttcaggccccatctcaaagaaatatgaataatggtacccggttaactgat
ccaagctcattagggattcttggtgcaagaccatcggaaaataaacgcactgtgaatgaa
aggccatacaggacgcgacaggcaggtttaccaacaaaacaaggttttacatcacgtatt
aagtag

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