KEGG   Malus domestica (apple): 103430252
Entry
103430252         CDS       T03194                                 
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03430  Mismatch repair
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103430252
   03460 Fanconi anemia pathway
    103430252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103430252
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     103430252
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c fvmX5
Other DBs
NCBI-GeneID: 103430252
NCBI-ProteinID: XP_028946194
LinkDB
Position
12:complement(join(3734948..3734992,3735103..3735269,3736057..3736225,3736599..3736760,3737251..3737413,3738766..3738874,3738965..3739059,3739683..3739821,3739951..3740020,3740157..3740255,3740371..3740519,3740774..3740984,3741097..3741231,3741508..3741580,3741738..3741910,3741998..3742234))
AA seq 731 aa
MEIEAEEEEQVATEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDARSSSINVV
VKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYV
AHVTVTTITKGQLHGYRVSYKDGVMEHEPKACAAVKGTQITIENLFYNMTARRKTLQNSA
DDYSKIVDLLSRFAIHHMNVSFSCRKHGAARADVNSVSTASRIDAIRSVYGVSVARSLMT
IEASDKDPSSSVFQMDGFISDSNYVAKKITMVLYINDRLVDCTALKRALEVVYAATLPKA
SKPFIYMSIMLPPEHVDVNVHPTKREVSLLNQEIIIEKIQSVVEWRLRSSNETQTFQEQA
VEPSSSSQMVSRKDSNQNPSPSAASKLHKVPVNKMVRTDSSNPAGRLHVYLQPDPRGHLE
RNASLTAVRSSVRLRRNPKETADLTSLQELIDEIDSNCHSGLLDIVRHCTYIGMADDVFA
LLQHDTHLYLANVVNLSKELMYQQVLRRFAHFNAIQISEPAPLKELIVLALKEEEDPECS
VNHELNEKIAEMNTELLKQKAAMLGEYFSIHIDNDGNLSRLPVILDQYTPDMDRVPELVL
CLGNDVDWEEEKKCLQVISAALGNFYAMHPPMLPNPSGDGLQFYQKRKPFRNPEESTSCN
TGDDDVMTENEIEHELVAEAENAWAQREWSIQHVLFPSMRLFFKPPNSMATNGTFVRVAS
LEKLYRIFERC
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggaaattgaggcagaagaagaagagcaagtcgcgacggagccacccaaaattcaccgc
ctagaagagtctgtggtgaaccgaatcgctgccggcgaggtcatccaacgccctgtctcc
gccgtcaaagagctcgttgagaacagcctcgatgcccgctcctcctccatcaacgtcgtc
gtcaaggacggcggcctcaaactcatccaagtctccgacgacggccacggcatccgctat
gaggacctgccgatcctgtgtgagcggcacacgacgtcgaaactctcggcgtttgaggac
ttgcagtcgataaagtcgatggggttcagaggagaagcacttgccagcatgacgtacgta
gctcacgtcaccgtcaccaccattaccaagggccagttgcatggttatagggtatcttat
aaagatggtgtaatggagcacgaaccgaaggcgtgcgctgctgtaaaaggaactcaaata
acgattgagaacttgttctataacatgactgcccggagaaagacgctacaaaattctgct
gatgattattcaaagattgtagatttgctaagccggtttgcaattcatcatatgaatgtt
agcttctcctgcagaaagcatggagctgctagagcagatgttaattctgtttccacggca
tcaaggattgatgcaattcgatcggtgtatggggtgtctgttgctcgcagtctgatgaca
atagaagcttcagataaagatccttctagctccgtttttcagatggatggctttatctcc
gattcaaactatgttgccaagaagataaccatggtgctttatataaatgatagattggtt
gattgcaccgctctgaagagagctctagaagttgtttatgctgccacattgccaaaagca
tcaaaacccttcatatacatgtcaattatgttaccacctgaacatgttgatgtgaatgtt
cacccgacaaagagagaggtaagccttctgaatcaggaaatcatcattgagaagatacag
tcagtggttgaatggaggttgagaagctccaatgagacacaaacatttcaggaacaggca
gtcgaaccttcttcatccagccaaatggtttcaagaaaggattcaaatcagaacccctca
ccatctgcagcatcaaaattacacaaggttccagtgaataaaatggttagaacggattca
tcaaatcctgctggtaggttgcatgtgtatttgcaaccagatcctcgtggccatcttgaa
aggaatgctagcttgacagctgttagatcttctgttagactaagacgaaacccaaaggaa
accgctgatctgaccagccttcaggagcttattgatgaaattgacagcaattgtcattct
ggtctactggacattgtgagacactgcacatacattggaatggcagatgatgtttttgca
ctgcttcagcatgatacccatctttatcttgcaaatgtagtgaacttgagcaaagagctc
atgtatcagcaagtcctgcgtcggtttgcccattttaatgctatacaaataagtgagcca
gccccactgaaggagttgattgtgttggcactaaaagaggaggaggatccagaatgcagt
gtgaatcatgaacttaacgagaagattgcagagatgaatacagaactactcaagcaaaag
gctgctatgttgggggagtatttttccattcatatagataatgatggaaatttgtctagg
cttccagtcatacttgatcaatacacacctgacatggatcgtgtccctgaacttgtgctt
tgtttgggcaacgatgttgattgggaggaggaaaaaaaatgccttcaagtaatttcagct
gcacttggaaatttctatgccatgcatcctcctatgttgcccaacccatctggtgatggc
ttgcaattttaccaaaagagaaagccttttaggaatcctgaagaaagtacctcatgcaat
actggagatgacgacgtcatgacagaaaatgaaattgagcacgaactagttgcagaggca
gaaaatgcatgggctcagcgcgaatggtcaatccagcatgttttgtttccatcaatgagg
ctctttttcaagccaccaaattctatggctacaaacggaacatttgtacgggtagcttca
ctggagaaactataccggattttcgaaagatgctga

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