Malus domestica (apple): 103430558
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Entry
103430558 CDS
T03194
Name
(RefSeq) TMV resistance protein N-like
Organism
mdm
Malus domestica (apple)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_8
AAA_22
LRR_4
AAA_16
AAA
ATPase_2
NACHT
AAA_24
AAA_14
nSTAND3
C-JID
Motif
Other DBs
NCBI-GeneID:
103430558
NCBI-ProteinID:
XP_028945583
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All DBs
Position
12:complement(27569000..27573796)
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AA seq
1173 aa
AA seq
DB search
MALVRAAQGTSSDSNTRRGYRYDVFLSFRGEDTRRNFTDHLYTALNNAGYLTFRDNDELE
RGEDIKPGLQKAIRLSRTSVVVFSKYYASSKWCLDELVMILERKRTTSDHVVLPVFYDID
PSHVRKQTGSIGKAFARHEKTQLPNTVKRWRKALAEVADLAGMVLPNEADGYESKFITKI
VKVIGDKLIRTPLSVQSNLIGIQSRVKRINLWLQDGSDDVGIVTVYGMSGIGKTTIAKCV
YNSNFTSFEGSSFVENIRETANQPNGLVQIQMQVLYDILKGKKEKVHNVSEGISKIERAI
CSRRVLLVLDDVDRMDQLDALLRMKDRFYPGSKIIITTRRERLLKALQVTMVHEVGTLGY
DESLELFCWHAFGQDHPREGYMEYSKELVQHCGGLPLALQVLGSSLLGESVGVWKSALEK
LKVIPNDEIMNKLRISYDSLQDNHDRQLFLHIACFLVGRDKNYIVRILDGCDFFTNVGIQ
NLIDRSLVKIEADKVKMHDLIRDMGREIVRLESEEPEKRSRLWRHKDSFEVLREKTGTQT
IQGLVLDMHRHPANSPINTNVTVLETNAFERMHKLRLLHLRSVRLEGCYADFPTRLRWLC
WLEFPLDSIPIDFPLECLIVLEMQYSSLREVYKGTKFLPSLKILDVSHSHGLSQTMDFSY
CPNLEELILEDCGSLLDVHESIGNLERLVYLNLKNCKNLRMLPKNMCMLKSLETLILSGC
SNLVEMTKKMESLKMLETDGIPRSELWPGRSSSILTYLPCSLVELSLRSCNLSDDAFATD
LSNLSSLQVLYLDDNPISSLPVFIKGLTKLWLLSFDNCERLESLVGLPKITHMDVYGCIS
LKQITYQSYGLRALTYMGENRNVLEVEYYDNLEQIERVDVEMRKLFSLHNLEMRKLFSLQ
NFEEVDGVWSPVQGLDRHGIYSTFFSGNEVPGRFSYRSTGSSISFIVPSLSNHKIRGLNI
FATYANENNMSYSGNDPFMSIEVSNKSKGMKWTYGPRFSGPGWGEDVTWLSHWKMDNETI
ILECGDEVVVSVMTRRPDEHIQVKEFGVELVQEHQDQMSTQHNTTPDPNDPFVIGGDLSP
LEHISGLYDFCWFEEAEMKNVDLCRPKWLNTLIMDSDKEEEQQNDLDHKIAAASARGNNC
HLRGWRGLVTAAIFLLTLTLIVPPSISRKKKRQ
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgtgagagcagctcaaggaacatcctctgattccaacactcgtcggggttac
cgttacgatgttttcttgagtttcagaggcgaagacactcgcaggaattttaccgaccac
ctatacacagccttgaacaacgcaggatatctaacgtttcgagataacgacgagcttgag
agaggagaagatatcaagccaggactacagaaagcaatccggctgtcacgaacatctgtt
gtcgtgttttcgaaatattacgcgtcatccaaatggtgccttgatgagcttgtcatgatc
cttgaacgcaagaggactacctcggatcatgtagtattaccagtcttctacgatatcgat
ccatcccatgtgaggaagcagacgggaagcattggaaaagcatttgctagacacgagaaa
actcagttgccgaatacggtgaagcgatggaggaaggctcttgcagaggttgctgatcta
gcagggatggtcttaccaaatgaagctgatgggtacgagtcaaagtttatcacaaaaatt
gttaaggtgattggtgacaagctaattcgcacacccttgagtgttcaatccaacttgatc
ggaatccaatctcgagtcaaacgcatcaatctatggttacaagatggatctgatgatgtt
ggtatagttactgtgtatgggatgtctggaatagggaagacaaccattgctaaatgtgta
tacaattcaaatttcacaagttttgaaggaagcagctttgttgaaaatatcagagaaacg
gcaaatcaaccgaatgggttagttcaaatacaaatgcaagttctttatgatattttgaag
gggaaaaaggagaaagtgcacaacgtcagcgaaggaataagtaagattgaaagagccata
tgctctagaagagttcttcttgttcttgatgatgtagaccgtatggaccaattagatgca
ttactacggatgaaagatcggttttatcccggaagtaaaataatcataacaacaaggcgt
gaaaggttgctaaaggcacttcaagttactatggtgcatgaagttggaactttgggttac
gatgaatcattagagctcttctgctggcatgcttttggccaggaccatccccgtgaaggt
tacatggaatattcaaaagagctagtgcaacattgtggaggacttccattagctcttcaa
gttttgggttcttctctgttaggtgaaagtgtgggtgtgtggaaaagtgcattggagaag
ctaaaagttattcctaatgatgaaatcatgaataaactgagaataagctatgatagttta
caagataaccatgaccggcaattattcctccacattgcttgtttcctagtaggaagggac
aaaaactacattgttagaatactagatggatgtgatttctttacaaatgttggcattcaa
aatctcattgatagatccttggtgaaaattgaagccgacaaggtgaaaatgcacgatctg
attcgtgatatgggaagagaaatagttcgcctagaatcagaagagcctgagaaacgtagt
agactatggcgccataaggattctttcgaagtattgagggaaaagacgggtacccaaaca
atccaaggtcttgtcttggatatgcataggcatcctgcaaacagtccaataaacacaaat
gtgactgtcttggaaaccaatgcatttgaaaggatgcacaaattgcgactactccatctt
agaagcgtacggctggagggatgttatgcagatttccctacaagattaagatggttgtgt
tggcttgaatttcctttggattctataccaattgattttcctttggagtgtctaattgtt
cttgaaatgcaatatagtagcttgagagaagtctacaaaggaacaaaatttcttccatca
ttgaagatccttgatgtgagccattctcatggccttagtcaaaccatggacttctcatac
tgccccaatctagaggaattgattcttgaagattgtggaagcctgcttgatgttcatgaa
tccattggaaacctagagagacttgtgtacttgaatctgaagaattgcaagaaccttagg
atgcttccaaagaacatgtgcatgctaaaatcacttgagactctcattttatctgggtgc
tcaaatcttgttgagatgacgaagaagatggaatctttaaaaatgctcgaaacagatgga
attcccagaagtgaattatggcctggaagaagttcaagtatcttgacttatttgccatgt
tctttagtagagttaagtcttcgtagctgcaatctttctgatgatgcctttgctacggat
ttaagtaatctatcctcattgcaagtactatatttagatgataatccaatttctagccta
cctgttttcatcaaaggtttgacgaagctctggttactctcttttgataactgtgagagg
ctcgaatcacttgtggggttgccaaaaataacacacatggatgtatatggttgcatatca
ctaaaacaaataacctatcaatcctatgggttgagagcgttgacctatatgggtgagaac
cgcaatgtacttgaggtcgagtactatgacaacttagaacaaattgaaagagttgacgtg
gaaatgaggaaacttttcagtttgcacaacttggagatgaggaaacttttcagcttgcaa
aattttgaagaagttgatggggtttggagtcccgttcagggacttgatcgacatggtata
tatagcacattcttttctgggaatgaggttcctggccggttcagctatagaagtacaggg
tcctcaatatcttttattgtgccttctctttcaaatcataaaattcggggcttgaatatc
tttgctacctatgcaaacgagaacaatatgagttattcggggaatgatccatttatgagt
attgaagtgagcaacaagagcaagggtatgaagtggacctatggcccacggttcagtggt
cctggttggggagaagatgtgacatggttgagccattggaaaatggacaatgaaacaata
atattagaatgtggagatgaagtggttgtttccgtaatgacgaggagacctgatgagcat
attcaggtaaaggagtttggggttgagcttgtgcaagagcaccaagaccagatgagtacc
caacacaacaccactccagatcctaatgatccatttgtcatcggtggagatttgtcaccg
ctggaacacatttcaggactatacgacttttgctggttcgaggaagcagaaatgaaaaat
gttgacttatgtaggccgaaatggttgaataccctcatcatggactcagacaaagaagaa
gagcaacagaacgatcttgatcacaaaattgcagcagcgagtgccagaggcaataactgc
catctgagaggatggagggggctagtcactgctgccatcttccttctcacgctaactcta
atcgttccgccctccatctctcgaaaaaagaagcgacagtag
DBGET
integrated database retrieval system
