Malus domestica (apple): 103430619
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Entry
103430619 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103430619
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
103430619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
103430619
NCBI-ProteinID:
XP_008366986
LinkDB
All DBs
Position
13:2123827..2132886
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AA seq
1601 aa
AA seq
DB search
MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKSDDSIREPPNKSQKRVLA
LNRELPPRNEQFLLDFEQLQSQLPDQDQLRVVTESVLISLVVQCSNHAPQAEFLLFALRS
LCTIGHINWDTFLPSLLSSVSAAEMSVGQGSQAMRTVSSQSGMLPSSNAIPNSFNFQSSS
PASPLPSVHGIGSPSQSAIEPSSMSPVKSSDIASNGQQAMARFNSSIRDNAISSLRQLCC
KIILTGLKFNLKPVTHANIFSHMLNWLVNWDQKQLGVDESDSVRSWRPGKALIEWLHXLD
VIWLLVDEEKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKMLDQHL
HCPTFGTHRIFTQTTPSVSGEAVATLRYSPITYPSVLGEPLHGEDLATSIPKGSLDWERA
LRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFISEMICEATIDRIVELLKLT
NSDINCWQQWLVFSDIFFFLIKSGCIDFVDFVDKLVSRLNEGDQQILRTNHVTWLLAQII
RVEHVMNALNQDARKVETTRKILSFHKEDRSSDPNSPQSILLDFISSCQNLRIWSLNTTT
REYLNNEQLQKGKQIDEWWRTASKGDRMMDYMNMDERSIGMFWVVSYTMAQPACETVINW
LSSAGVIESLPGTNLQSNERLMVMREVCPLPMSLLSGFSMNLCLKLAYQMEESLFSGQVV
PSIAMAETYCRLLLIAPYSLFRSHFNHLAQRNPSVLSKPGVTLLVLEILNYRLLPLYRYQ
GKSKALMYDVTKIVSALKSKRGDHRVFRLAENLCMNLILSLRDFFLVKREGKGPTEFTET
LNRVTVVTLAIIIKTRGIADADHLLYLQTMLEQILANSNHTWSEKTLRYFPSLLRDVLIQ
RIDKRGLAIQEWQQAETTVINQCTQLLSPSADPTYVMTYISHSFPQHRQYLCAGAWILMQ
GHPENINSVNLARVLREFSPEEVTSNIYTMVDVLLHHIQLELQHGHSLQDLLLKACANLA
FYIWTHELLPLDILLLALIDRDDDPHALHIVISLLDRQELQQRVKLYCVNRGPPEHWLFS
GPFKRVELQKALGNHLSWKDRYPTFFDDIAGRLLPVIPLIIYRLIENDAIDSAEGILVMY
STFLKYHPLRFTFVRDILAYFYGHLPGKLIVRILNGLEVNKIPFSESFPVHMNLSNSTMC
PPADYFATLLLGLVNNVIPPLHNNSKSGANDALNNSMRAPPNKTPPTSQSGQANVSDGQK
AFFQIQDPGTYTQLVLETAVIELLSLPVSSSQIVSSLVQIVINIQPTLIQSSNGLHGAPN
GVGQGSVLPTSPSGGSTDSLGTTSRSAASGSGINASNFVSRSGYTCQQLSCLLIQACGLL
LAQLPPDFHVQLYLEASRIIKETWWLTDGKRSMGELDSAVGYALLDPTWAAQDNTSTAIG
NIVALLHSFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPKLANAHALFSK
ALSLILSMMVDVFGKNVQPPIPVEPLEIADIIDFFHHVVHYEGQGGPVQANSKPRPEVLA
LCGRAAESLRPDIQHLLSHLKPDTNSSIYAATHPKLNQNSS
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaaccagagaccatcctcctcggcgtcagctgcctcgcgagcttaccagttt
caccccgcacgcgcagcaattgtcaatctcttcgacctctacttaggaagaagtagccgc
caaaaatccgatgattcaattcgagaacctccgaacaagtcacagaagcgtgtacttgct
cttaatcgagagcttccacctcgaaacgagcagttcctactagattttgaacaactgcag
agccagcttcctgaccaagatcaactgcgtgtcgtgacagagtctgtacttatatcttta
gtcgtgcaatgcagcaatcatgcgccgcaggcggagtttcttctctttgctctaaggagc
ttgtgtactataggtcacattaactgggatacttttttgccatcccttctttcttcagtc
tctgctgcagaaatgtcagttggtcaaggtagtcaagcaatgcgtactgtttcatcgcag
tccggtatgcttccatcttcaaatgcaatccccaactcgtttaattttcaatcttcaagt
cctgcctctccgttaccttcagtgcatggcattggttcccccagccagtctgctattgaa
ccatcatctatgtcaccagttaaatcatctgacatagcctccaatggacagcaggctatg
gcaaggttcaactcatctataagagataatgccataagcagtcttcgtcagctgtgctgc
aagatcattttaactggactcaaatttaatttaaaaccagtgactcatgctaacatcttt
tcccatatgcttaattggctggttaattgggaccaaaaacaacttggggttgatgaatct
gatagtgtaagatcctggagacctggaaaggcgctaattgaatggctacatnagctggat
gtgatttggcttttggttgacgaggaaaaatgccgagtgcccttctatgaattactgcga
agtgggttgcaatttatggagaatatacctgatgatgaagccttatttactctaatcttg
gagatccataggaggcgagatatgatggccatgcacatgaaaatgttagatcaacaccta
cattgccctacatttgggactcatcggattttcacgcagacaactcctagtgtttcagga
gaagcagtagcaaccttgcggtattcaccaatcacatatccaagtgttcttggagaacca
ttgcatggagaggaccttgcaacttcaattccaaaaggaagtttggattgggagagagct
ttgcgttgcataaggcatgctctttgtactactccatcacccgactggtggaaacgggtg
ctgcttgtagccccctgctacaggtctccttctcaaggacctactcctggtgctgttttc
atctctgaaatgatttgcgaggcaacaattgatagaattgttgagctattgaaattgacc
aattcagatattaattgctggcaacagtggcttgtcttttcggatatattcttttttctt
attaaaagtggctgtattgattttgttgattttgtggacaagctagtttcacgccttaac
gagggtgatcaacaaattcttaggacaaatcatgtcacttggcttcttgctcaaattatt
cgggttgaacatgtgatgaatgctctaaatcaagatgctagaaaggtggagacaacaaga
aagatcctatcgtttcataaagaagataggagctcagatccaaatagtcctcaaagtata
ctgctggacttcatcagcagttgccagaatttacgtatttggtcattgaacacgacaact
agagaatatctgaataatgagcagcttcagaaaggaaagcaaatagatgaatggtggagg
acagcgagcaaaggggaccgaatgatggattatatgaatatggatgaaaggtcaattggg
atgttttgggttgtgtcttacaccatggcgcagccagcttgtgaaactgtgatcaattgg
ttatcctctgctggggttatagagtcgttaccaggaacaaacttacagtccaatgagagg
ctaatggttatgcgggaagtatgtccattgccgatgtccttgttatctggcttttcaatg
aacctatgtttaaagctggcgtatcaaatggaagaatctttattttctgggcaggttgta
cctagtattgcaatggctgaaacatattgtaggctgctactcattgcaccttactcatta
tttcgttctcatttcaatcatttggcgcaaaggaatccctcggtattgagcaagccaggc
gtaactcttttagtgcttgaaatattgaattaccgtttgcttccactttacaggtaccaa
ggaaaaagcaaagccttgatgtatgatgttacgaaaatagtttctgctctaaaatcaaaa
cgtggagatcaccgtgtatttaggttggctgagaacttgtgtatgaatcttattctgtct
ctgagagactttttcttggtgaaaagagaagggaagggtccaactgaattcacagaaact
ttgaatcgagtaacagttgtcactcttgcgatcatcattaagacacgaggaattgctgat
gctgatcatctgctttatcttcaaaccatgttagagcagatattagccaatagtaatcac
acatggtcagagaaaacactacgctatttcccttctcttctacgtgatgttttgatccaa
cggattgataaaaggggcctggcaattcaagaatggcagcaggccgaaaccactgtgatt
aaccaatgcacccagcttttgtccccttccgctgatcctacatatgtaatgacctatatc
agtcacagttttcctcaacaccgacaatatctatgtgctggtgcatggatcctgatgcaa
gggcacccagaaaacattaacagcgtaaacttagcacgtgtcttgagagagttttctcct
gaggaagtaacatctaatatttatacaatggtggatgttctgcttcatcatattcagttg
gaacttcagcatggtcattctttgcaggatcttttattgaaagcttgtgcaaacctagct
ttttatatttggacccacgagttgctccctttggatattttgctcctggcacttattgat
cgtgacgatgacccccatgctttgcatatcgtgattagtctacttgatcggcaagaactt
caacagagggtgaaactatattgtgtgaatcgaggtccccctgaacactggcttttctct
ggaccctttaagcgagttgaattgcaaaaggcccttgggaatcatctatcctggaaggac
aggtatcctactttcttcgatgacattgcagggcgtttgctcccagtcattccgttgata
atttatagactaattgaaaatgatgccatagattcagctgaaggaattctggtcatgtat
tctacatttcttaaataccaccctttaagatttacatttgttcgtgacatacttgcatat
ttttatggccatcttcccggaaagctcattgtccgaatattgaatggactcgaagtcaac
aagatcccattttctgagtcattcccagtgcatatgaatttatcaaattccaccatgtgc
ccacctgccgattactttgcaactctcttactgggactagtgaataatgtcattcctcca
ttgcataacaactcaaaatctggagcgaatgatgctttaaataattcaatgcgtgcccca
cctaacaagactcctccaacgtcgcagtctgggcaagcaaatgtttctgatggccaaaaa
gcattctttcaaattcaggatccaggcacatatactcagctggttcttgaaacagcagtc
attgaactgctctctcttcctgtatcttcatcccagattgtatcatcactggttcagatt
gtcatcaatatacaaccaacattaattcaatccagcaatggcctgcatggagctccaaat
ggtgttgggcaaggctctgttttaccaacatccccttcgggtggaagcacagattccttg
ggcacgacgagcaggtcagctgcttcagggtcaggaataaatgcatctaactttgtttct
cgaagtggttatacatgccaacagttgtcttgcttattgatccaagcatgtggtcttcta
ctggctcaactgcctcctgattttcatgtgcaactctatctagaggcatcacgtataata
aaagaaacgtggtggctcactgatggcaaaaggtcaatgggagaattagactctgctgtc
ggttatgctttgttggatccaacatgggctgctcaagacaatacctcgaccgccattggt
aatattgttgccctgctccattcgtttttcagtaacctcccacaagagtggctagaaggg
acccatcttatcatcaaacatctcaggccggtgacttcagttgcaatgttgagaatagca
ttccgaataatgggtcccttgctccctaaactagccaatgcgcacgccctcttcagtaag
gctctgtcattgattttaagtatgatggtagatgtcttcgggaagaatgtacagcctccg
atcccagtcgagccattagaaatagcagatataattgacttcttccatcacgtcgtccac
tatgaagggcagggaggtcctgtgcaggctaacagcaagcccagaccagaggttttagct
ctctgtggaagagctgcggaaagtctgcgtccggacatacaacaccttctttcccactta
aaacccgacacgaattcttccatttacgctgctacgcatcccaagttgaaccagaattcg
tcgtaa
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integrated database retrieval system
