Malus domestica (apple): 103430958
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Entry
103430958 CDS
T03194
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein isoform X1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
mdm
Malus domestica (apple)
Pathway
mdm03010
Ribosome
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
103430958
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103430958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mdm03011
]
103430958
04121 Ubiquitin system [BR:
mdm04121
]
103430958
Ribosome [BR:
mdm03011
]
Ribosomal proteins
Eukaryotes
Large subunit
103430958
Archaea
103430958
Ubiquitin system [BR:
mdm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
103430958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
103430958
NCBI-ProteinID:
XP_008367323
UniProt:
A0A498JPT5
LinkDB
All DBs
Position
14:complement(join(2802481..2802507,2802658..2802724,2803700..2803802,2803904..2804093))
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctaaccgggaagaccatcactctcgaggtcgagagcagc
gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaagacggccgcaccctggctgactacaac
atacagaaagagtcgactcttcatctcgtgctgaggctccgcggagggattatcgagcct
tctctcatggctttggctcgcaagtacaatcaggagaagatgatttgcagaaagtgctat
gctcgtcttcatccaagggcagtgaactgcaggaagaagaagtgtggccacagcaatcag
ttgaggccgaagaagaagatcaagtag
DBGET
integrated database retrieval system
