KEGG   Malus domestica (apple): 103431077
Entry
103431077         CDS       T03194                                 
Name
(RefSeq) nuclear pore complex protein NUP98A-like
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103431077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103431077
   03036 Chromosome and associated proteins [BR:mdm03036]
    103431077
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103431077
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103431077
SSDB
Motif
Pfam: Nucleoporin2 Nup98_GLEBS
Other DBs
NCBI-GeneID: 103431077
NCBI-ProteinID: XP_008367451
LinkDB
Position
14:join(22783072..22783090,22783416..22783706,22784464..22785168,22785286..22785513,22785616..22786133,22786226..22786307,22786416..22786476,22787001..22787139,22787321..22787437,22787541..22787718,22788072..22788110,22788287..22788978)
AA seq 1022 aa
MFGSSNPFGQSSSSPFGSQSVFGQTSSTNNNPFAPKPFGSTTPFGAQTGSTMFGGTSTGV
FGAAQASSPFPSSTTFGAASSPAFGNTTPAFGATSSPSPSPFGGSSGFGQKPVFGAFGSN
PAQTSPFGSTTQPSQPAFGSSVFGSSTPFGGSSQPAFGATTTPAFGATSTPAFGATSTPA
FGATSSPAFGATSSPAFGATTTPAFGATTTPAFGATSTPAFGAATTPAFGATSSPAFGST
TSPTFGSTGAAFGVSSSPLFGSGGAFGASSTPAFGSSSSTFGTSTNPAFGASSAPGFGSS
STPSFSFPSTPTFGQSSSAFGSSQFAASSPFGAQSSPFGAQSTTFGNTGAFGQSAFGGQQ
RGGSRVAAYAATPEPDGGTGASAAGKLESISAMPAYKEKSHEELRWEDYQLGDKGGPAPA
GSSGFGITTSQPNPLNPAQAFQASSPFNATTSSNLFAPKTPSFTNTGFATSSTPFSSSGF
GISTSTSPFTPSQPSTVFPQTSSSSLFSSSSSAYSFPAPAATATSTFNSNPFNPTPPAAQ
TGGAFTNPFGQNTTFSQPFSNPSTGFGLTISTAAGATSSQMGFSQPAPTFSVPFSSQPTQ
NSGFNFNSFNQTQSGNTGGLGSSTGILGQNNFGQLPATQSSVAVQPVPATNPFGTLPAMP
QMSIGRGGTAPSIQYGISSMPVVDKPAPVKVSYLLTSRHLSQRRVRLPARKYNPKNDDPR
FPFFVDDEETDNTPKADALFLPRENPRALVIRPKEQWPQRVGAEKASPLKDTSTPVHENG
KILGEAGSEDKDKTPKENGIVKERANHVKVNQKPNGIHDDHSVQKGDSYMTLSGHRAGEA
AIAYEHGADIEALMPKLRRTDYYTEPRIQELAAKERLDPGFCCRVKDFVVGRVGYGSIKF
FGETDVRCLDLEALVQFNNREVIVYMDDNKKPPVGQGLNKPAEVTLLNITCTDKKTGRQF
TEGPKTERYKQMLKKKAEDQGAEFVSYDALKGEWKFRVKHFSKYELGEEDDWDTDAAAAQ
DC
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgttcggttcttctaatccctttggacagtcatctagcagcccgtttgggtcccaatcg
gtatttgggcagaccagcagcacaaataacaatccttttgcccctaagccttttggtagt
acaaccccatttggtgcgcaaacagggagtaccatgtttggaggaacttcaactggtgta
tttggcgcagctcaagcttcttcaccttttccttcctccacaacctttggtgctgcgtcc
tcaccggcttttggaaatacaacgcctgcttttggagcaacttctagtccttcaccatca
ccttttggtggttcatctggttttggtcagaagcctgtgtttggagcatttgggtccaat
cctgctcaaacaagtccttttggaagtacaactcaaccatcacagccagcatttgggagc
agtgtatttggttcctccacgccatttggtggatccagtcagccagcatttggtgctacc
accaccccagcttttggtgctacaagcaccccagcttttggtgctacaagcaccccagcc
tttggtgctacgagtagtccagcctttggtgctacaagtagtccagcctttggtgctacc
accaccccagcttttggtgctaccaccacccccgcttttggtgctaccagcacgccagct
tttggtgctgccaccaccccagcatttggagctacaagtagcccggcctttggttccaca
acaagtcctacatttggaagcacaggagctgcatttggggtgtcgagttctcccttgttt
ggatctgggggagcttttggggcttcaagcaccccggcctttggttcatctagctcgacc
tttggtacttcaaccaatcctgcttttggtgcttcaagtgctcctggttttggttcgtcc
agtactccatcgttcagctttccatcaactcctacctttggccaatcaagttctgcattt
ggtagcagccagtttgccgcttcatcgccttttggagcacagagttctccgtttggagct
caatcaacaacatttgggaacactggtgcctttgggcagtcagcttttgggggccaacaa
cgcgggggcagtagagtggctgcatatgctgcaactcctgaacccgatggtggcactggg
gctagtgctgctgggaaattggagtcaatatcagcaatgcctgcatataaagaaaaaagt
catgaagaactccgctgggaggattatcaattgggggataaaggtggtccagctcctgct
ggttcgagtggctttggcattaccacctcacagccaaaccctttgaatcctgcacaggca
tttcaagcctcaagtccttttaatgccacaacttcatctaatttgtttgctccaaaaact
ccatccttcactaatacaggctttgcaacatcgtctacaccattcagttcatcaggtttt
gggatttctacttcaactagtccttttacaccatcacaaccttctacagttttcccgcaa
acctcatcttcgtctctctttagttcgtcaagctctgcatattcatttcctgctccggct
gcgacagctacttccacatttaattcaaacccgttcaatcccacacctccagctgcccag
acaggtggtgcttttaccaatccatttgggcagaatacaacattttctcagccattcagt
aacccttctactggctttggtttaacaatctccactgctgctggtgctacaagcagtcaa
atgggttttagtcaaccagctccaactttttctgtgcctttctcatctcagccaactcag
aatagtggttttaacttcaacagttttaatcaaacccaatcaggcaacacaggtggtttg
ggaagttcaacaggaattcttggtcagaataactttggacagttgcctgccactcaaagc
tctgtagctgtacaaccagtacctgctacaaatccatttggaacgctccctgcaatgcca
cagatgtcaattggtcgtggtggaactgcaccgtcaattcaatatggaatttcaagcatg
cctgtcgtagacaaacctgcgcctgttaaggtatcatatttgttgacctctcgacacctg
tcacaaaggcgggtcaggttacctgcgagaaaatataatcctaagaatgatgatccaagg
ttcccattctttgttgacgatgaagaaacagataacacacccaaggcggatgctcttttc
cttcccagagaaaacccaagagcactcgtcattcgtccaaaagaacagtggcctcaaagg
gttggtgctgagaaagcatccccattaaaggatacttcgactccagtgcatgagaatgga
aaaattctaggagaagcaggctctgaggataaagataaaacgccaaaagaaaatggaatt
gtgaaagagcgggcgaatcatgtcaaagtcaaccagaaacctaatggaattcatgatgat
cattctgttcagaaaggggactcatatatgacactaagtgggcatagagccggtgaggct
gctattgcatatgagcatggtgctgacattgaggccctaatgccaaagctccggcgtaca
gactattatacagagcctcgaatccaagaattggcagctaaggaaaggttggacccgggg
ttctgctgtcgtgtcaaggactttgtggttggacgagttgggtatggtagcatcaagttc
tttggggagacagatgtgcgatgccttgatctcgaggctctggtgcagttcaacaatcgg
gaggtgatagtgtacatggatgacaataagaaacctcccgtcgggcaaggcctcaacaaa
cctgctgaggttacacttctcaacattacatgcactgacaagaaaacaggacgtcagttc
acagaaggcccaaagactgagagatacaagcagatgctgaagaagaaggcagaggatcaa
ggagccgaatttgtttcttatgatgccttgaaaggcgagtggaagttcagggtaaagcac
ttcagtaagtacgagttgggagaggaagacgactgggataccgatgctgctgctgcccaa
gactgctga

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