KEGG   Malus domestica (apple): 103431276
Entry
103431276         CDS       T03194                                 
Name
(RefSeq) protein SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103431276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103431276
   04131 Membrane trafficking [BR:mdm04131]
    103431276
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103431276
Membrane trafficking [BR:mdm04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    103431276
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR5 WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_IFT140_1st DSE1_N WD40_Gbeta
Other DBs
NCBI-GeneID: 103431276
NCBI-ProteinID: XP_070667726
LinkDB
Position
14:join(19561854..19562094,19564264..19564287,19567823..19567983,19568126..19568240,19568448..19568548,19568785..19568862,19569288..19569443,19569592..19569704,19569849..19569975,19570153..19570284)
AA seq 415 aa
MTSSFATLYSLFSSPSRLPRLHHPSLLLDDIPKHLGPRTTTTQPISILSSSSAPPISVPR
RQHRRRDHHHPFTTVACHNFDRSSSDCADMEKPLVALDKGTTCSSWNYSGQRLATGSVDG
TLTVFDSRDPCSSSLSCTSKSKVHEAAGIVKIGWVPPEYGDAVACVCTDGTLLLWEEVAE
DAQPLQWKLCISFNGGSAQLLDTQFGVSAAGLKMVTAYSDGRVKVYELLDPLELKNWQLQ
AEFQNVIDSVSTVGPAMCLSASISWNPRRGESQESSFVLGFSSNTPQLNSAKVWEFDQAH
QRWLPVAELASPGDNDNQVYAVVWAPNIGRPYEVIAIATHKGISIWHLGLNPDSNGRLSL
KKIAVLSGHKGEVWQMEWDMSGMTLATTGNDGSVRLWQSSLNGVWHEEATFEPTS
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgacatcatcctttgcaactctgtattcgcttttctcatcgccatcacgactaccacga
ctgcaccatccgtctctcctccttgatgatatcccaaagcacctaggtcctagaaccacg
acgacacaacccatctcaattctctcttcctcttcagcaccacccatttcggttcctaga
cgacagcaccgccgtcgtgatcatcatcaccctttcaccaccgtcgcctgccataatttt
gatcggagctccagtgactgtgcggatatggagaaacctctggtggcgctcgataaaggc
accacttgctcttcttggaactactccggccagagattagccactggctccgtcgacgga
actctcaccgtcttcgactcgcgcgacccttgctcttcctccttgtcctgcacctcaaaa
tccaaggtacacgaggctgctggcattgtgaaaattggttgggttccgccggaatacggt
gacgcagtggcgtgtgtttgcacagatgggactttgttattgtgggaggaagtagctgaa
gatgcacaacctcttcaatggaagctgtgcataagctttaacggcggttcggctcaactg
ctagatacccagtttggagtctcagcggcaggtttaaaaatggtcactgcatattcagat
ggccgtgtcaaggtttatgagctactggatcccttggaactgaagaattggcaacttcag
gcggaatttcagaatgttattgattcggtgtctacagttggccctgccatgtgcttatct
gcatctatatcttggaatccacgaagaggagaaagccaggaatcaagttttgttttgggt
ttcagttcaaacacaccacaacttaattccgccaaggtatgggaatttgatcaggctcat
caaagatggctcccggttgcagagttggcctcgcctggtgacaacgataatcaggtttat
gcagttgtgtgggcaccgaacattggaaggccgtatgaggtaattgctattgccactcac
aagggaatatcaatatggcatcttggtctaaaccctgactcaaatggaagactctcattg
aagaagattgcagtactttcgggtcacaaaggcgaggtctggcagatggaatgggatatg
agtggaatgactttggcgaccaccgggaatgatgggtcagtaaggttatggcagtctagt
ttgaacggagtttggcatgaagaggctacttttgaacccacgtcgtag

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