Malus domestica (apple): 103431282
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Entry
103431282 CDS
T03194
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103431282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103431282
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103431282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103431282
NCBI-ProteinID:
XP_008393694
LinkDB
All DBs
Position
15:complement(join(4441217..4442026,4442319..4442540))
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AA seq
343 aa
AA seq
DB search
MDSDQAKLFVGGISRETNEETLRAHFRSYGTVLGSVIARDRSNHNPRGFGFVWFSDISSA
DKALEDPHVILGRTVEVKKAIPRPRNQHQSRMVSRSVENGTQFRTKKIFVGGLSAGLTED
GFKNYFEKFGSVSDVVVMHDYKTRRPRGFGFITFDSEDSVENVMQESFHELNGRSVEVKR
AVPKEENGNNESGYTDYAPRFPRICPPYTCSPAPTYGVLPFPTPYNGLGPFAYGTSVYGG
GWYPSVAACGTPYDIAPIAPQPWVFPYGNALYPGYMSGGGSAAGSYNGILGPAVFTGGKP
NQVVFGSGLPPVNVKPSQVEVKKLDVDSRSNSTAVKKKYSKRS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggactccgatcaagctaagcttttcgtcgggggaatctctcgggagacgaacgaagag
acgctgagagctcacttcaggagctacggcaccgttttgggctccgtcattgccagggac
cgcagcaaccacaaccctagagggtttggcttcgtctggttctcggacatttcttcagct
gacaaagcccttgaagacccgcacgtcattctgggcagaacggtagaggttaaaaaagca
attcccagaccccgaaaccaacatcaaagtagaatggtgagtaggagtgtggagaatgga
actcagtttagaacaaaaaaaatcttcgttggcggtttatcagcaggtttgacagaggac
ggatttaaaaattattttgagaagtttgggagtgtatcagatgtggttgtgatgcatgac
tacaaaacccgcaggccccggggctttggttttatcacctttgattcggaggattctgtt
gagaatgtgatgcaggaaagctttcatgagttgaatggtaggtctgtggaggtcaagaga
gctgtgccaaaggaggagaatggcaataacgaaagcggttatactgattatgcgcccaga
ttccccagaatctgccctccttatacttgtagccctgctcctacatatggggttcttcct
tttccaacaccttataatggtcttgggccatttgcgtatggaaccagtgtttatggcggt
ggttggtacccttcagtagcagcttgtgggacaccttatgacattgctccaattgcacct
cagccatgggtgtttccttatggaaacgctttatatcccggctacatgagtggtggaggc
tcggcggctggcagctacaacgggatccttgggcctgctgttttcaccggtggcaaacca
aatcaggttgtgttcggcagtggacttccaccagttaatgtgaagccatctcaggttgaa
gtgaagaagctggacgtcgattctcgatccaacagtactgctgtcaagaaaaaatactca
aaaagatcttga
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