Malus domestica (apple): 103431377
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Entry
103431377 CDS
T03194
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103431377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103431377
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
103431377
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103431377
mRNA degradation factors
5'-3' decay
Decapping complex
103431377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
103431377
NCBI-ProteinID:
XP_008367784
LinkDB
All DBs
Position
01:join(22132712..22132791,22133087..22133238,22133709..22133836,22134085..22134180,22134814..22134966,22135262..22135365,22135453..22135520,22135841..22136031)
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AA seq
323 aa
AA seq
DB search
MSGLPRSSSALLKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
EKNPSLKSFSLKEFTSLLFNSCDVLRPYVAHIDDIFKDFTSYKVKVPVTGAIILDETFER
CLLVKGWKGSSWSFPRGKKNKDEEDHACAIREVLEETGFDVTNLLDKDEYIEVIFGQQRV
RLYIIAGVREDTAFAPLTKKEISEIAWHRLDDLQPASDDVISRGITGLKLYMVSPFLATM
KSWILSHQSPVAPRPDMPLKGISVWNTKSSSIGSSTMIVESQPTKPEPEVRPPDTGAGNS
FRNFRFDVAPVLQAIDAGFRSPM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctccctcggtcatcgagtgctttactgaagaacggccttcccccacaagaa
ctccttgatgatctctgcagtcggtttgttctaaatgtgccaaaagaagacctgcaatca
tttgagaggattttatttctcgtggagtatgctcattggttttatgaggacaactcagtg
gagaaaaatccatcgctgaagtcatttagtttgaaggagttcacttctttattgtttaac
agctgtgatgttcttagaccttacgttgcccatatagatgacatatttaaggacttcact
tcttacaaggtcaaggttcctgtaactggcgcaatcattttggatgaaacctttgaaagg
tgcttactcgtgaagggttggaaagggtcaagctggagtttccctcgtggcaaaaagaac
aaagatgaagaagaccatgcatgtgccatcagagaagtcctggaagaaacaggttttgat
gttacaaatcttcttgacaaagacgagtatattgaagttatatttggacaacaaagggtg
cggctgtacattattgctggtgtgagggaggatactgcctttgcaccactcaccaaaaag
gagatcagtgaaattgcatggcaccggctggatgatcttcagcctgcaagtgatgatgtg
atatctcgtggtatcaccggcctcaagctttacatggtgtcaccttttctagcaacaatg
aaatcatggattttatcacatcagtccccagttgctccaagacctgatatgcctctcaaa
ggaatcagcgtgtggaatacaaaaagcagctcgatagggagtagcaccatgatagtggag
agccaaccaactaaacctgaacccgaggttcgtcctccagacacaggagcaggcaacagt
ttcagaaacttcaggtttgacgtagctccagtcttgcaagcaattgatgctggtttccgt
tctccaatgtaa
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