Malus domestica (apple): 103431594
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Entry
103431594 CDS
T03194
Name
(RefSeq) small RNA degrading nuclease 3-like isoform X2
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103431594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103431594
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-60S particles
RNases
103431594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Tmemb_cc2
Pox_A21
Relaxase
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
103431594
NCBI-ProteinID:
XP_008367985
LinkDB
All DBs
Position
15:complement(26428598..26433674)
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AA seq
516 aa
AA seq
DB search
MDDLFATAEKKVLVEIVKLSQKRGMKGDKGDWKQFLSSYDKKFGASLSDPGRRSNDVLTA
FLKTLNNEDDLKVLAKVVQCHTTRQAVEQLLKNFPENESPEQKLVRATLEHPQYPLDYSF
ASNDQDWVATKLGKKSKVMTSNAMFAVDCEMVLCEDGSEALVKVCVVDADLQVKLNEFVN
PCKEVTDYRSEITGVSASDLDGITCTLKDIQKLLKKLLSDGTILVGHSLCNDLQALKLEH
ARVIDTAYIYRYSDGPIHRKPSLNNLCKSVLGYEVRKQGSPHNCLDDACAAMKLVLAKIK
GEVGVIAPPAQEDVREVNMAKLLLHRIPITVPSEELHNVIPGNYTIQVKQPSVKVQGDKY
SAFAIFTSPQEAHQAYEKVQGSREKDSCGRPQKLIAFKLSTGVTADLFVRKMANVDSSAQ
VSSKRALEVEENSGVHKKQKTGQKAEEETTAELNQCCDHLKEMERLKEEQQKALEKCSDQ
LKEIEGLKQQLQNKEFEISTLNKIVSKLQGGKKKGK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttattcgctactgcagagaaaaaggttcttgtggaaattgtgaaattgtcc
caaaagagagggatgaagggtgataaaggagactggaagcagtttttaagtagttatgat
aagaagtttggggctagcttgagtgatcccggtaggcggtccaacgatgtactgactgca
tttttgaagactttgaacaatgaggatgatttgaaggttttggctaaagttgtccaatgc
catacaacccgccaagccgtggagcaattgttaaagaattttccggaaaatgaatccccg
gagcagaagcttgtccgtgcaactcttgagcacccacaatatccactggattactcgttc
gcatcaaatgatcaggattgggtagctacaaagctaggtaaaaaatccaaggtgatgacc
tcaaatgcaatgtttgctgttgattgtgagatggttctatgtgaagatggctctgaagct
ttagtaaaggtgtgcgtagtggatgccgatttacaggtcaaactgaatgaatttgtaaac
ccttgcaaagaagttactgattacagatctgagattacaggagtttcagcatcggatttg
gatggaattacatgcacattgaaggatatacagaaactcttgaagaagttgttgtcagat
ggtactattttagtcgggcatagcttatgtaatgacctgcaagcactgaagttagaacat
gccagggtgatcgatactgcatatatctacagatactctgatggacctattcatagaaaa
ccttccttgaacaatttgtgtaagtctgtattgggttatgaagtccggaagcaaggttct
ccacacaattgtctggatgatgcttgtgctgcaatgaaactagttcttgctaagataaag
ggcgaagttggtgttattgcccccccagctcaggaggatgtacgtgaagttaatatggca
aagctacttctgcataggataccaattacagtgcctagtgaagaactgcacaatgtcatt
cctgggaactatacaatacaagtcaagcaaccatctgtgaaagtgcaaggagataaatat
tctgcctttgctatctttacgagtccacaagaagcacatcaggcatatgaaaaagtccaa
ggcagccgggagaaggactcatgtggacggccccagaaacttattgcatttaagctcagc
acaggtgtaactgctgatttattcgttcgtaaaatggcaaacgttgattcctctgcccaa
gtctcatcaaagagagctttagaagttgaagagaactcaggtgtacataaaaaacaaaag
acaggtcagaaagcagaagaggagacaacggcagagctaaatcagtgctgcgatcacctt
aaagagatggaacgtttgaaggaagaacaacaaaaggccctagagaagtgttctgatcaa
ttaaaggagattgaaggactgaagcagcaacttcaaaataaagagtttgaaatttcgaca
ctgaataagattgtttctaaactccaagggggcaagaaaaaagggaagtag
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