KEGG   Malus domestica (apple): 103431594
Entry
103431594         CDS       T03194                                 
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X2
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103431594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103431594
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103431594
SSDB
Motif
Pfam: DNA_pol_A_exo1 Tmemb_cc2 Pox_A21 YkyA
Other DBs
NCBI-GeneID: 103431594
NCBI-ProteinID: XP_008367985
LinkDB
Position
15:complement(join(26069156..26069551,26070692..26070799,26071024..26071131,26071225..26071359,26071703..26071803,26071971..26072040,26072143..26072259,26072363..26072503,26072996..26073064,26073214..26073303,26073391..26073573,26073840..26073872))
AA seq 516 aa
MDDLFATAEKKVLVEIVKLSQKRGMKGDKGDWKQFLSSYDKKFGASLSDPGRRSNDVLTA
FLKTLNNEDDLKVLAKVVQCHTTRQAVEQLLKNFPENESPEQKLVCATLEHPQYPLDYSF
ASNDQDWVATKLGKKSKVMTSNAMFAVDCEMVLCEDGSEALVKVCVVDADLQVKLNEFVN
PCKEVTDYRSEITGVSASDLDGITCTLKDIQKLLKKLLSDGTILVGHSLCNDLQALKLEH
ARVIDTAYIYRYSDGPIHRKPSLNNLCKSVLGYEVRKQGSPHNCLDDACAAMKLVLAKIK
GEVGVIAPPAQEDVREVNMAKLLLHRIPITVPSEELHNVIPGNYTIQVKQPSVKVQGDKY
SAFAIFTSPQEAHQAYEKVQGSREKDSCGRPQKLIAFKLSTGVTADLFVRKMANVDSSAQ
VSSKRALEVEENSGVHKKQKTGQKAEEETTAELNQCCDHLKEMERLKEEQQKALEKCSDQ
LKEIEGLKQQLQNKEFEISTLNKIVSKLQGGKKKGK
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggatgatttattcgctactgcagagaaaaaggttcttgtggaaattgtgaaattgtcc
caaaagagagggatgaagggtgataaaggagactggaagcagtttttaagtagttatgat
aagaagtttggggctagcttgagtgatcccggtaggcggtccaacgatgtactgactgca
tttttgaagactttgaacaatgaggatgatttgaaggttttggctaaagttgtccaatgc
catacaacccgccaagccgtggagcaattgttaaagaattttccggaaaatgaatccccg
gagcagaagcttgtctgtgcaactcttgagcacccacaatatccactggattactcgttc
gcatcaaatgatcaggattgggtagctacaaagctaggtaaaaaatccaaggtgatgacc
tcaaatgcaatgtttgctgttgattgtgagatggttctatgtgaagatggctctgaagct
ttagtaaaggtgtgcgtagtggatgccgatttacaggtcaaactgaatgaatttgtaaac
ccttgcaaagaagttactgattacagatctgagattacaggagtttcagcatcggatttg
gatggaattacatgcacattgaaggatatacagaaactcttgaagaagttgttgtcagat
ggtactattttagtcgggcatagcttatgtaatgacctgcaagcactgaagttagaacat
gccagggtgatcgatactgcatatatctacagatactctgatggacctattcatagaaaa
ccttccttgaacaatttgtgcaagtctgtattgggttatgaagtccggaagcaaggttct
ccacacaattgtctggatgatgcttgtgctgcaatgaaactagttcttgctaagataaag
ggcgaagttggtgttattgcccccccagcacaggaggatgtacgtgaagttaatatggca
aagctactcctgcataggataccaattacagtgcctagtgaagaactgcacaatgtcatt
cctgggaactatacaatacaagtcaagcaaccatctgtgaaagtgcaaggagataaatat
tctgcctttgctatctttacgagtccacaagaagcacatcaggcatatgaaaaagtccaa
ggcagccgggagaaggactcatgtggacggccccagaaacttattgcatttaagctcagc
acaggtgtaactgctgatttattcgttcgtaaaatggcaaacgttgattcctctgcccaa
gtctcatcaaagagagctttagaagttgaagagaactcgggtgtacataaaaaacaaaag
acaggtcagaaagcagaagaggagacaacggcagagctaaatcagtgctgcgatcacctt
aaagagatggaacgtttgaaggaagaacaacaaaaggccctagagaagtgttctgatcaa
ttaaaggagattgaaggactgaagcagcaacttcaaaataaagagtttgaaatttcgaca
ctgaataagattgtttctaaactccaagggggcaagaaaaaagggaagtag

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