Malus domestica (apple): 103432389
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Entry
103432389 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103432389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103432389
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103432389
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103432389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_UBOX
zf-C3HC4_2
Nop14
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103432389
NCBI-ProteinID:
XP_008368801
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All DBs
Position
10:19520460..19521761
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AA seq
433 aa
AA seq
DB search
MRPRRHLSPGFLPSEESDEEVSIIRRTKRARLSRPNPFAPHTRVRAPRAKRVRGDVEREE
EESDHDFTPVTMVRASRARRGRGYAGREEDESDSDGSEGDRYSDGGEVDHYRDGGEVDHY
HDRSEEGDRYRDRSEEGDGYRDRSEEEDRYRDGSEDEEREEDDKIEVEDEEENNERSDKT
IITLTDPYLFECPICYEPLTIPVFQCDQNGHIACSSCISKMNNKCPSCSGSICSNRCRAI
EKILESVSTISCRNAKHGCKESVTYDKRSEHQKTCVYSPCSCPHIGCDFVASSKQICQHF
RHKHFGSAKRFEYHCSFPVTLSVTDKFVVFQEKNEGTLFVLKNHCVKELGNAVTLSCIQP
SSTGGFFYDLVAKTKGNRLRLQAFTKSTPRIIIDDSPPKTGFHLIPTDFISSCGQLKMDL
CIWPEDDHPISIL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcggccccggcgccatttatcacctggtttccttccaagtgaagagtcagatgaagaa
gtcagcatcatccgaaggaccaagagagctcgtctgagtcgtccgaatccttttgctcct
cataccagggttagggcacccagggccaaaagggttcgaggagatgtggaaagagaagaa
gaggaaagtgatcacgacttcactcctgttacaatggttagggcatccagagccagaaga
ggtcggggatacgcgggaagagaagaagatgaaagtgatagtgatggaagtgaaggagat
cgctatagtgacggaggtgaagtagatcactatcgtgacggaggtgaagtagatcactat
catgacaggagtgaagaaggagatcgctatcgtgacaggagtgaagaaggagatggctat
cgtgacaggagtgaagaagaagatcgctatcgtgatggaagtgaagatgaagaaagagaa
gaagatgataaaatcgaagttgaagacgaagaggaaaataatgaaaggtctgataaaact
atcataaccctaactgacccatatctgtttgaatgcccaatttgctatgaacctttgacc
atccctgtcttccaatgtgatcaaaatgggcatatagcttgctcctcttgcatcagcaaa
atgaataacaaatgtccctcctgctccgggtccatttgctctaatcgttgccgtgcaatt
gagaagatccttgaatcagtttcaacaatatcatgccgaaatgccaagcatggatgcaaa
gagtcggtcacttatgacaaaagaagtgaacatcaaaagacttgtgtgtactcgccttgt
tcatgcccccatataggctgtgactttgtcgcttcatccaagcagatatgtcaacacttc
aggcataaacattttggttcggcaaaacgatttgagtaccactgcagttttccagttacc
ttatcagttactgacaaatttgtggttttccaagaaaagaatgaaggtacattatttgtt
ctcaagaaccattgtgttaaagaactaggaaatgccgtgacgcttagctgtattcaaccc
agctccacaggaggcttcttctatgaccttgttgcaaaaaccaagggaaatcgcctaaga
ttacaggctttcacaaagagcactccaagaattataattgatgatagccctcctaaaaca
ggtttccacttaatcccaactgattttatcagttcttgcggccagctcaagatggatctc
tgcatatggcctgaggatgaccaccctatatccatcctttga
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