Malus domestica (apple): 103432494
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Entry
103432494 CDS
T03194
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103432494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103432494
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103432494
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
103432494
NCBI-ProteinID:
XP_008368919
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Position
03:complement(join(36152668..36153465,36153565..36154057,36155158..36155630))
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AA seq
587 aa
AA seq
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MREMQRMVNSFPEEVLEYVFSFIQTDQDRNSISTVCKSWYEIERWCRRRIFIGNCYAVSP
RMLIRRFPDVRSIELKGKPHFADFNLVPEGWGGYVYPWIAAMASAYPWLEEIKLKRMVVT
DETLELIAKSFKNMKLLVLSSCEGFSTDGLASIAANCRNLRELDLHESDVEDLSGHWLSH
FPDTYTSLVSLNIACLGSELSFSALERLVARCPNLRSLRLNRSVPLDRLANLLRLAPRLT
ELGTGAYSAELRPDVFAILSRAISGCKELKSLSGFWDVVPTYLPAIYSICPGLTSLNLSY
STIQSPDLVKLVSQCPNLQRLWVLDYIEDVGLDALAESCKDLRELRVFPSDPFVVEPNVS
LTEQGLISVSEGCPKLHSVLYFCRQMSNDALITIARNQPNFTCFRLCIIEPKIPDYLTLQ
PLDVGFGAIVENCKNLRRLSVSGLLTDQAFDYIGTYGKKLEMLSLAFAGDSDLGLHHILS
GCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQRLPRLNVEVI
DERGHPESRPESSPVEKLYIYRSVAGPRFDMPGFVWTMDEDSALRVT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaatgcagagaatggtgaactcgtttcccgaggaggttctggagtacgtgttc
tcgttcatacagactgaccaggaccggaactcgatctcgacggtgtgcaagtcgtggtac
gagatcgaacggtggtgcaggcggaggattttcatcgggaactgctacgccgtcagcccc
aggatgctgatcaggcggttcccggacgttagatccattgagctcaaaggaaagcctcac
ttcgccgacttcaatctggtcccggaaggctggggtgggtacgtgtacccttggatcgcc
gccatggccagcgcctacccttggcttgaagagatcaagctcaagaggatggtcgtcacc
gacgagaccttggagctgattgccaagtccttcaagaatatgaagctcctcgtgctttcg
tcctgtgagggattcagtactgacggactcgcctccattgctgccaattgcaggaatcta
cgggagctggacttgcatgagagcgatgtggaggacctgagtgggcattggctgagccat
tttcctgatacatacacgtcacttgtgtcccttaacattgcttgcttggggtctgagttg
agtttctctgccctggagcgcctggtggctaggtgtcccaacctgaggagtctccggctc
aatcgttccgtgcctcttgacaggctagccaatctacttcgcctggcacctaggctgact
gagttaggcacaggggcctactcagctgagttgcggcctgatgtcttcgcaatcctatca
cgtgccatctcaggatgcaaggaactcaagagcctatctggattttgggatgtggtacca
acatatcttccagctatttattctatctgccctgggctaacatcactaaatttgagttat
tccacaattcaaagcccggatcttgtaaagcttgttagccaatgcccgaatctgcagcgc
ctctgggtattggattacattgaagatgttggccttgatgccctggcggaatcttgcaag
gatctacgagagttaagggtgtttccctcggatccatttgtggtggaaccaaatgtgtcc
ttgacagagcagggcctcatatctgtttctgagggctgtccaaagctccactcagttctg
tacttctgccggcaaatgtccaatgatgcattaatcaccattgctaggaaccagcctaac
tttacatgttttcgtctttgtataattgagcccaaaattcccgactacctgacccttcag
ccccttgatgtgggttttggggccattgttgagaactgcaagaatctccggcgattgtcc
gtttctggtctactaactgatcaagcatttgattatatcggaacctatggtaaaaagttg
gagatgctgtctttagcctttgccggagatagtgacttggggcttcatcatatattgtct
gggtgcgataatcttcggaaattggagatcagggattgtccttttggtgacaaggctctt
ttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcatgctcagtg
agttatggagcatgtaagctacttggccagaggttgccgaggctaaatgttgaagttatt
gacgagagggggcacccagaatccaggccggagagctctcccgttgagaagctctacatc
tataggtccgttgcagggccaaggtttgacatgcctggttttgtttggaccatggatgaa
gattcggcattgagggttacttga
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