Malus domestica (apple): 103432695
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Entry
103432695 CDS
T03194
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103432695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdm03032
]
103432695
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103432695
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103432695
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103432695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
103432695
NCBI-ProteinID:
XP_028956290
LinkDB
All DBs
Position
03:complement(join(37602434..37603018,37603223..37603439,37603548..37605890,37605977..37606021,37606171..37606240,37606334..37606418,37606528..37606629,37606876..37606980,37607127..37607216,37607344..37607427))
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AA seq
1241 aa
AA seq
DB search
MTEGSSPAKTFVGVRFLLLGFDPLDEHQVRSKLVDCGGEDAAHYSPNCTHVIVDKIVYDD
PVCVAARNDAKTLVTALWVHHSFDVGLPIDPTSIIYRPLRDLNGIPDAKRLIVCLTGYQR
QDRDDIMTMVGLMGAQFSKPLVANKVTHLVCYKFEGEKYELAKKIPKMKLVNHRWLEDCL
RDWQLLPEENYNISGYELEMMEAEARDSEDEAENTFGKQSGVRSMYKSPHNIKAGSPATS
RLPKSEGEVRKVPLIFDNAIGNLSIPRNENKLDQTSSFSNSYVSKGLGCQDARELRDSSG
CDLNDQHHRTPDPKVRDDFISNCGSAGRASHSAGKLSYSRQTLCMPTVPTYTGDKSSGCS
VSSKVPICKSSATLKDQANDKFDPNCVEVPLKGIHLQNGEESSGILPRKRVMDLSYASSK
SQKMSPGAKSGSMHSPSPSNKSPKGKPTSLIDGSCRTTSHYIVTNDDHSPDKTSNLNAAG
NSMAGVSPAKLSNLIQKPLACDLPFSATVISNMGKDENANMKSPLTTIRRLRKPSLSNKP
GIVDCAEEKSTAAVSKAVELQNQPQDVEGSSASNKKSVNNSSNDPADLNMLKEGNNDLVT
KHLEQKVKSKKTLGSRPRLVSANQKGSVHLYKDASLNDTAVLYNAGDSQKSPDPTKLDVL
CPDVNVEAPNELEGKDVDMSADVDEKNIESMDDETEAPEEESEHKLENVVHEAKDIVVQA
TSKCDKKSEQEQHLQDHSDACTPRDAMASLGIEGNEREKSVSDNISLLVEPAADGDAVKG
KKNQGKKHALGKTKLKTVHPVADVMKPKKVVSEENTRNDNTRVTEKKKEKRLAGLVGKAK
CRSAPQNKLENSAKMKENKPIVGGDQTVSKAKQQAEKSIAKSGKTPLKIIQTSAERSDNP
SIPEGKASSKVKIEPVRFILSGHRFQRKEFQKVIKRLKGRCCRDSHHWSYQATHFISPDR
VGRTEKFFAAAASGRWILKSDYLEASDKEGRFLEEEPYEWYKNGLSEDGTINLEAPRKWR
LLRKRTGHGAFHGMRVIIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKSGVDYAI
VSPGMPRADMWVQELLNHEIPCVVADYLVEYVCKPGYPLDRHVLYNTNAWAEKSFERVQS
RAEEVVEEAFTGEDGEDGDDASCGGGSDIPCVVCGSGERGEVMLICGNESGSVGCGIGTH
IECCNPPLESVPEDDWFCPDCSWSKNSTKSSKKRKKGRSSK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggaagttcaccggccaagacgtttgtaggcgtccgtttccttcttttggga
ttcgacccccttgacgagcaccaggttcgatctaagcttgtagattgcggcggagaggat
gctgcccactattcccccaattgcacccacgtcattgtggataaaattgtgtatgatgat
cccgtatgtgttgctgctcgaaatgacgccaagactcttgtcaccgctttatgggttcat
catagttttgatgtcggactccccattgatcccacttcgattatatacagacctcttaga
gatttgaatggtattccggatgccaagagactaattgtatgcttgactggatatcaacga
caagatagagatgacattatgacaatggttgggttaatgggtgctcagttttctaagccc
ttggtggcaaacaaagtcactcatctcgtatgctacaaatttgagggggagaagtacgaa
cttgccaagaaaatcccaaagatgaagcttgtcaaccatcgttggttggaagattgctta
agggattggcaacttcttccagaagagaattacaacattagtggctatgaactggagatg
atggaggctgaggctagagattcagaagatgaggctgaaaacacatttgggaagcaatct
ggggtgagaagcatgtataagagtcctcacaatataaaagctggctcaccagcaacgtct
agattgcctaaatcagaaggagaggtgcgaaaggttcccttgatttttgataatgccatt
ggcaacttatcaattcctcggaatgagaataaattggatcaaacctcaagcttttctaat
tcttatgtttccaagggattaggctgtcaggatgcacgtgagttgagggattctagtggc
tgtgacctaaatgatcaacatcaccgaacccctgaccctaaggtgagagatgatttcatc
tctaattgtggttctgctggaagagcttcgcactctgctgggaaattaagctactcaagg
caaaccttatgcatgccaacagttccaacatacacgggcgataaatcaagcggttgtagt
gtgtcttctaaagtacctatttgcaaatcaagtgccactttgaaagatcaagcaaatgac
aaatttgaccccaattgtgttgaagtccctttaaaaggaattcatttacagaatggagaa
gagtcaagtggtatattgcctcggaaaagggtgatggatctctcttatgctagctccaaa
tcacagaagatgagtccaggtgcaaaatcaggcagtatgcatagtccttcaccaagtaat
aaatctccgaaaggaaagcctacatctttgattgatggttcatgcaggactactagccat
tatattgtcacaaatgatgaccactctccggataagactagcaatttgaatgctgcagga
aactcaatggctggtgtttcaccagccaaattatctaatttaattcagaagccattggca
tgtgatctccctttctctgccactgtgatctcaaacatggggaaagatgaaaatgcaaac
atgaaatcacctctaaccactattcgaagattaagaaagcctagcttatccaacaagcct
ggtattgtagattgtgctgaggaaaagtctacagctgcagtcagcaaagcagtggaactg
caaaatcagccacaagatgttgagggttcatctgcaagtaacaaaaagtcagtgaataac
agttccaacgaccctgctgatctgaacatgcttaaagagggaaataatgacttagtaaca
aaacatcttgagcagaaggtgaagtccaagaagactctgggttctaggcctaggttagtt
tctgctaaccaaaaggggtctgtgcacttatataaagatgcctccttaaatgatacggca
gttctttataatgcaggggattctcagaaatctcctgatcccacaaagcttgatgtgctt
tgtccagatgttaatgttgaggccccaaacgagctggagggaaaagatgttgacatgtct
gcagatgttgatgagaaaaacattgaatctatggatgatgaaactgaagctccagaggaa
gaaagtgaacataaattagagaatgtagttcacgaagccaaggatatagtggtccaagca
acaagtaaatgtgataagaagtcagaacaggagcagcacctacaggatcattctgatgcc
tgtactccccgtgatgcaatggcctcattgggtatagaaggaaacgaacgagaaaagtca
gtttctgacaacatttctctgctggttgagccagccgcagacggagacgctgtcaaggga
aagaagaaccaagggaaaaagcatgctttgggtaaaaccaagctgaaaactgttcaccct
gtcgcggatgttatgaaacctaaaaaagtagtatctgaggaaaatactcggaatgataac
actagggtgacagagaagaaaaaagaaaaaagacttgcaggtctagtgggcaaagctaag
tgccgcagtgcgccccaaaataagttagagaactctgccaaaatgaaggagaacaagcca
attgttggtggagatcaaactgtaagcaaggccaaacagcaggcagaaaaatcaatagct
aaatctggtaaaactccgttgaagataattcaaacatctgcggagagaagtgacaatcct
tcaatacccgaagggaaggcttcaagcaaagttaaaattgaacctgttaggtttattctg
agtgggcaccgatttcaaagaaaggagtttcaaaaagttatcaagcgtttgaaaggaaga
tgttgccgggattctcatcactggtcttaccaggcaacacacttcatctctccagatcga
gttggcaggacagagaaatttttcgcagctgcagcgtctggaaggtggattcttaagagt
gattatctggaagctagtgataaggaaggaaggtttttggaagaagaaccttatgaatgg
tacaagaatggtcttagtgaagatggtacaatcaatttggaggccccaaggaagtggcgg
ctcttgagaaagagaacaggccatggtgctttccatggaatgcgcgttatcatatatggc
gaatgtattgcaccacctttggatactctgaagcgtgtcgtgaaggctggtgatggaaca
atattggcgacttctcctccttatacccgcttccttaagtcgggggttgactatgccatt
gtcagcccaggcatgccgcgtgccgatatgtgggtacaagagttgttgaaccatgagata
ccctgcgtagtggccgattacttggttgagtacgtgtgcaaacctgggtacccgctcgac
agacacgtgctatacaacaccaatgcgtgggcggaaaagtcttttgagagagtgcagagc
agagcggaagaggtggtggaggaagcgtttacaggtgaggatggtgaggatggtgacgat
gctagttgtggtggtggtagtgacataccttgcgtggtgtgtgggtctggggagagaggg
gaggtgatgctgatatgcggcaacgaaagtgggagcgttgggtgtggaattggtactcat
atcgagtgctgcaatccaccacttgaaagtgttccggaggatgactggttttgtccagac
tgtagctggagcaaaaacagcaccaagtcgtccaagaaaaggaaaaagggtaggagcagc
aaatga
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integrated database retrieval system
