KEGG   Malus domestica (apple): 103432767
Entry
103432767         CDS       T03194                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103432767
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:mdm01001]
    103432767
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103432767
   03036 Chromosome and associated proteins [BR:mdm03036]
    103432767
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     103432767
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     103432767
Protein kinases [BR:mdm01001]
 Serine/threonine kinases: Other
  TAF1 family
   103432767
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103432767
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    103432767
SSDB
Motif
Pfam: DUF3591 Bromodomain ubiquitin TBP-binding Rad60-SLD zf-CCHC_6
Other DBs
NCBI-GeneID: 103432767
NCBI-ProteinID: XP_008369193
LinkDB
Position
04:join(69222..69267,69860..69966,70152..70214,70355..70400,71260..71511,71663..71754,72894..73041,73317..74421,75053..75255,75392..75629,75915..76251,78054..78263,78393..78485,81264..81464,81638..81844,82037..82526,82841..83025,83184..83300,83970..84029,84112..85248,86218..86580)
AA seq 1899 aa
MGGDSYDGSQDGRDEDDEEEYEDVGRGSRFLGFMFGNVNDSGGLDADYLDEDAKEHLAAL
ADKLGPSLTGINLSVKSPQTSTDAVEEDYEEKAENAVNYFDIDEDFEGPEIQAATEEDHL
LPRKEYFSAQGSFATLEPTNSMFDDEDYDEEIGQEHEVVESNIEVQTISLPGVSTGEKYS
EDDCQIGGLDSGNLAARAEEFQEVLTDKSATPLPVLCIEDGKVILRFSEIFGIHVPLKKA
EKRDHRYSVPKDRYKSMDVSEIVEEDEESFLKGSGQGFQSLKQADALKHDIFSALYDEDS
DFAKFRVLKGANSVDLLDDRAIKDSCLIAERMKENQIVDISVERQSPLCSKFYPLDQQDW
EEGIVWGNSPIASDNSVESCEISGPDEASFNSETEPYSGTQNIQLKPQKEPDEKDHAVML
RSSCLLEPFGSRNSSEFSSLPFSESRRHPQLLRLESRFEVDDHADGAMESVSKKLHQSDA
VRQFSKLTSQNRDMLEGSWLDQIIWDPDMPTGKSKLILDLQDEQMLFEILDNKESEHLRL
HSGAMIVTRPIKSSNGDSFEFPGHGGQSGWRYVSNDKHYSNRKTSQQLKSNSKKRTAQGI
KIYHSQPALMLQTMKLRLSNKDVANFHRPKSLWYPHDNEVAVKERGKLPTQGPMKIIVKS
LGGKGSKLHVDAEETISSVKAKASKKLDFKPSETVKMFYLGKELEDDKSLTVQNVQPNSL
LHLVRTKIYLLPRAQKIPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAG
MGARLCTYYQKSAPDDQTASLLRNDNNSLGHVISLNPADKSPFLGDTKAGCSQSSLETNM
YRAPVFSHKVPSTDYLLVRSAKGKLSIRRIDRLNVVGQQEPLMDVMSPGTKNLQNYMINR
LLVYICREFRAAEKRHLLPCIRADELPSQFPYLSEPFLRKKLKEHANFQRASNGQCMWVK
KRNFRILSEDELRNLVKPEEVCAYESMQAGLYRLKHLGITETHPSAISSAMSRLPDEAIT
LAAASHIERELQITPWNLSSNFVTCTQGKENIERLEISGVGDPSGRGLGFSYVRAAPKPS
MSSAVVKKKSAAGRGGSTVTGTDADLRRLSMEAAREVLLKFGVSDELIARQTRWHRIAMI
RKLSSEQAASGVKVDANTISKYARGQRMSFLQLQQQNREKCQEIWDRQVQSLSAIDGEEN
ESDSEGNNSDLDSFAGDLENLLDAEECEEGLGGVHESNHDKSDGVKGLKMRRRPSLAQAE
EEIEDEAAEAAELCRLLMDDDETERKKKKKTRVLGEEVGLAPGLRTSYIVENADRGKKII
AAVQPDGFYTPKDNSVGDAKVVENFLKRNKTGKLKGMKKNDTTHTGLMNKKLKISGDGVK
STFKEKKSAREKFICGACGQLGHMRTNKHCPKYGYGEDQETQNDTPDPDKSSGKTTALNS
SSQSQQKTTTKKLVPKSATKIAVVEASEVENLGLSTKVLPLKFKCGSTEKLPDKQPLGET
ESSERVTSDPENGKPTMKVHKIIISNKMKPENVPVEPQKPPIVMRPLTDTDRGYVESQKQ
TIVIRPPANTDRDQGESQKLSVAKRSSMEAKREQHHKKIIIKRPKEIIDIDQISQDGGTP
VEHRKTKRIVELTSSEKHRKQENVYLAKEAANKKARDERRLREEQEKRINEDRLREERAR
RLYEEEMRMIEERERIAELRRYEALIRQEREEEERQKAKNKMKKKRSEIRDDYLEDSRAR
RLDKRMPERDRGAKRRPVVELGRHGGESTPATKRRRGGEVGLANILERIVETLKDRIEVS
YLFLKPVSKKEAPDYLDIIERPMDLSTIKEKVRKMEYKSREQFRHDVWQITYNAHRYNDG
RNPGIPPLADQLLELCDYMLVENDESLTEAEAGIEYVDI
NT seq 5700 nt   +upstreamnt  +downstreamnt
atgggtggtgattcatatgatggttcccaagatggaagggatgaagatgatgaggaagaa
tatgaggacgttggtaggggtagtcgatttcttggatttatgtttggcaatgtcaatgac
tctggtgggcttgatgctgattaccttgatgaggatgcaaaggaacatcttgctgcactt
gctgacaagctgggtccatcattaacaggcataaatctgtcagtaaaatcaccacaaaca
tcaactgatgctgttgaagaagattatgaagagaaggcagaaaatgcagttaattatttt
gatattgatgaggattttgagggaccagagattcaagctgctactgaggaggaccatttg
ttgccaagaaaggaatatttttctgctcaaggttcatttgctactttggagcccacaaat
tctatgtttgatgatgaagattatgatgaagaaattggacaggaacatgaggtggttgaa
agcaacatagaagttcaaactatctctttaccaggggtttctactggagaaaaatattct
gaggatgattgtcaaattgggggtctggactctggaaatttggctgctcgtgcagaagag
tttcaggaagtgcttacagataaaagtgccacaccgctgccagttctatgcatagaagat
ggaaaggtgatattacggttctcggaaatctttggtattcatgtgccgttgaagaaggcg
gagaaaagagatcataggtactctgttcctaaagataggtacaaatccatggatgtttct
gagattgttgaagaggatgaagagtcattcttaaaaggatctggtcaaggatttcaatct
ttgaaacaggcagatgcactcaaacatgacattttttcagcactctatgatgaagactcg
gacttcgcaaagtttcgtgttctaaaaggggcaaattcagtggatctgctggatgacagg
gcaataaaggactcttgtctcattgcggaacgaatgaaagagaatcaaatagttgacatt
tctgtggaaaggcaatcacctttgtgttcaaaattttatcctcttgatcaacaagactgg
gaagagggaattgtttggggaaattctcctatagcaagtgacaattctgttgagagttgt
gaaatttcgggacctgacgaagcttcatttaatagtgaaacagaaccttatagtgggaca
caaaatattcagttaaagccccaaaaagaacctgatgagaaggatcacgctgttatgctg
cgtagctcatgtctattggagccttttggctcaagaaattcatcagaattttcatctctt
cctttctcggaaagcagacgccatccccaacttttaaggctagaatctagatttgaagtg
gatgaccatgctgatggtgcaatggagagtgtcagtaagaagcttcatcagagtgacgct
gtgaggcaatttagcaaactcacttcacagaacagagacatgctggaaggatcttggtta
gaccagataatatgggacccagatatgcctactgggaagtcaaagcttatccttgatctt
caagatgagcaaatgctttttgagattttggataacaaggaaagtgaacatctcaggctt
cattccggggccatgattgtgactcgcccaataaagtcaagtaatggggattcttttgag
tttccaggtcatggaggtcaatctgggtggcgatatgtttctaatgataaacactattca
aataggaaaacttctcagcaactgaaatcaaattctaaaaaacgcacagctcagggcata
aagatttatcattcacaacctgcactgatgttacagacaatgaaactgaggttaagcaat
aaggatgtggcaaattttcaccgaccaaaatctttatggtatcctcatgacaatgaagtg
gctgtaaaagaacgaggaaagctccccacgcaaggaccaatgaaaattatagttaaaagc
ttgggtggcaaaggaagtaagcttcatgtggatgctgaggaaacaatatcttctgttaaa
gcaaaagcttcaaagaagttagattttaagccatccgaaacagtgaagatgttctattta
gggaaggaacttgaagatgataaatctcttactgtccagaatgttcaaccaaattctttg
cttcatcttgttcgcacaaaaatatatttgttgccaagagcacaaaagattcctggtgaa
aataaatctttgcggcctcctggagcatttaagaagaaatctgatctttctgtgaaagat
ggtcatgtcttcctaatggagtactgtgaagaaagacctttacttttgagcaatgctggt
atgggtgcaagattatgtacttattaccaaaaatcagccccagatgatcaaactgcttct
ttgttacgcaatgataacaacagtttgggacatgtcatttcactaaatccagctgataaa
tcaccttttcttggagatacaaaagctggttgtagtcagtcatctcttgaaacaaatatg
tatagagcacctgtattttctcataaggtgccctcaactgattatttgttagttcgttct
gcaaaggggaagctttcaattagacgtattgaccgcctaaatgttgttgggcaacaggaa
ccactcatggatgtaatgtctcctggaactaagaatcttcaaaattatatgatcaatagg
cttcttgtctacatctgccgagagttccgtgctgccgaaaagcgccatttacttccttgt
atccgcgcagatgagttaccttcacaatttccttatctatctgaaccctttcttcggaag
aagctgaaggaacatgcaaatttccagagagcatcaaatggacaatgtatgtgggttaag
aaacgcaacttccggattttgtcggaggatgaattaaggaatttggtgaaaccagaagag
gtgtgtgcctatgaaagcatgcaagctggtctttaccggctcaaacatttgggaattact
gaaacacatccgtctgccatatcttctgcaatgagtcgtctccctgatgaagcaattact
ctggctgctgcatctcacattgaaagagaactgcagatcactccatggaacttgagtagc
aactttgtaacctgtacacagggaaaagaaaatattgagcgtttggaaatatctggtgtt
ggtgatccatctggccggggcctaggtttcagttatgttcgtgctgctccaaaaccatca
atgtcaagtgcagtcgtgaagaaaaaatctgctgctggtcgaggaggttccactgttact
ggaacagatgctgatctacgcagattaagcatggaggctgcacgagaggttcttcttaaa
tttggcgtttctgatgagctgattgcaaggcagactagatggcatcgtattgcaatgata
cgcaagctttcaagtgagcaagctgcatctggggttaaagttgatgcaaacactatcagt
aaatatgcacgtggccagcgtatgtccttccttcagctgcagcagcagaaccgggagaag
tgccaagaaatttgggatcggcaagtgcagagtctttcagctatagatggggaagaaaat
gagagtgactctgaaggaaataatagtgatctagattcctttgctggggatttagaaaat
ctgcttgatgcagaagaatgtgaagaagggctaggtggtgttcatgaatccaatcatgat
aaatcagatggtgttaaagggcttaaaatgagaaggcgcccttccttggctcaggcagaa
gaggaaattgaagatgaagcagctgaagcagctgagttatgcaggttgctcatggatgat
gatgaaactgagaggaaaaagaagaagaaaacaagagttttgggggaggaagttgggctg
gctcctggcttgcgaacaagttatatcgtagaaaatgcagatagggggaaaaaaataatt
gctgctgtacaacctgatggattctatactccaaaagataattcagtcggagatgcgaaa
gtggtggaaaattttcttaaaagaaacaagactggaaaactaaaaggaatgaaaaagaat
gatactacacatacgggtctgatgaacaagaaactgaaaatatcaggagacggtgtcaag
agtacttttaaggagaagaaatcagcacgagagaaatttatctgtggagcatgtggtcag
cttggacacatgaggacaaacaagcactgccccaagtacggatatggagaagatcaggaa
acacagaatgatactccggaccctgataaatcatctggaaagacaacggctctgaattca
tctagtcagtctcaacagaaaactactacaaagaagctggtacctaaaagtgcaactaaa
attgccgtggttgaagcttcggaggttgaaaaccttgggctgagcacaaaggttcttcca
ttgaaattcaaatgtgggtcaactgaaaagcttcctgataaacagcctcttggagagaca
gagagttctgagcgggtcacatctgatcccgaaaatgggaagcccactatgaaggtgcac
aaaataataatttcgaacaagatgaaacctgaaaatgtacctgttgaacctcagaagccc
cctattgtgatgcgacctctgacagatacagataggggttatgtcgaatcacaaaagcaa
actattgttatacggccaccagcaaatactgatagagaccagggggaatctcaaaagctc
tcagttgctaaacggtcgtcaatggaggcaaagagagagcaacatcacaagaaaattata
attaaacgtccaaaagaaattattgatatagatcagatcagtcaggatgggggaactcct
gttgaacacaggaaaactaaaagaattgttgaattgacaagttctgaaaagcacaggaag
caggagaacgtgtatttggctaaggaagcagcaaacaagaaagctagagatgaaaggaga
ttacgagaggagcaagagaaacggataaatgaagacagattgagagaagagagggccagg
aggctttatgaagaggaaatgaggatgatagaggagcgagaaagaatagcagagcttaga
agatatgaagcattaatcagacaagagagggaggaagaagaacgccagaaagcaaagaac
aaaatgaagaagaaaaggtctgagataagagatgattatttagaggactcacgtgcacga
agattagacaaaaggatgccagaaagagatcggggtgcaaaaaggaggccagtcgttgaa
ttgggaaggcatggtggagaatctaccccagcaacaaagcgccgtagagggggcgaggtt
ggtctggcaaacatcttagagcgtattgtagaaaccctcaaagatcgaattgaagtatca
tatctttttctaaaacctgtatccaaaaaggaagctcctgattacttggacatcatagag
cgccccatggatctgtctacaatcaaggagaaggtgaggaaaatggagtacaagagcagg
gagcaattcaggcacgacgtgtggcagattacttataatgcccacagatataacgatgga
cgcaacccaggcatacctccccttgcagatcagctcttagagctttgtgactatatgttg
gttgagaacgacgaaagcttgactgaagccgaagcgggcattgaatatgtagatatctag

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