KEGG   Malus domestica (apple): 103433046
Entry
103433046         CDS       T03194                                 
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
  KO
K08740  DNA mismatch repair protein MSH4
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103433046
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    103433046
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_29 AAA_27
Other DBs
NCBI-GeneID: 103433046
NCBI-ProteinID: XP_028956830
LinkDB
Position
04:complement(join(7995532..7995696,7995918..7996040,7996118..7996232,7997142..7997240,7997321..7997373,7997490..7997646,7997992..7998050,7998192..7998259,7998345..7998488,7999302..7999365,8000128..8000178,8000265..8000404,8000530..8000669,8010056..8010141,8010258..8010403,8010503..8010575,8010910..8010985,8011123..8011230,8011416..8011462,8011702..8011747,8012086..8012198,8012293..8012328,8012480..8012683,8013331..8013396))
AA seq 792 aa
MEDDGGERSSIVVGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVSPNKLAPDGMVGVSELVDRFYATVKKVVMARGCFDDTKGAVLIKNLSAKEPSALGL
DTYYKQYYLCLAAAAATIKWIEAEKGVIVTNHSLVVTFNGSFAHMNIDATSVQNLEIIEP
LHSTLWGTSNKKRSLLNMFKTTKTVGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLAQVLRKFPKESDRVLCHFCFKPKKITNKVVGVDCARKSQVLVSSIILLKTALDAL
PLLSKVLKDAKCFLLANVYQSVCENEKYAAIRKRIGEVIDEDVLHARVSFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRQGFYFSMPHKDIQGK
LPSQFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYLRTEVCLEELVDAIREDVSALTL
LAEVLCLLDMIVNSFAHAISTKPADRYTRPEFTDNGPLAIDAGRHPILETIHNDFVPNNI
FLSEASNMVLIMGPNMSGKSTYLQQVCLIVILAQMGCYVPARFATLRVVDRIFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSQRSLVIMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFATHMENLSELVTIYPNVKILHFDVDIKNNRLEFKFQLKDGPRHVPHYGLLLAEVAGL
PSSVMETARNITSRITEKEVKRMEVNCLQYHPVQMAYHVVQRLICLKYSSQDEDSIREAL
HNLKESYIHGML
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggaagacgacggaggagagaggtcgagcatcgtcgtcggtctcatcgagaacagagcc
aaggaggttggagtggcagcttttgatttaagattagcttctctgcatctttctcaatat
attgaaactagcagttcatatcagaatacaaaaaccttgctgcaattctatgatcctatg
gtgattattgtttcaccgaacaagctggcacctgatggtatggttggagtttcagagttg
gtggacagattttatgctacagtcaagaaggttgtaatggcccgtggttgcttcgatgac
actaagggtgccgtactgattaaaaatttatcagccaaggaaccttcagcactaggattg
gatacttattacaagcagtattacctctgcttagctgctgctgcagctacaattaagtgg
atagaagcagagaagggagtcatcgtcacaaaccactcacttgtggtcacttttaatgga
tcatttgctcatatgaatattgatgcgactagtgtccaaaacttggaaatcattgagcca
cttcattcgacactttggggcaccagcaacaagaaaagaagtttattaaacatgtttaag
acaacaaaaacggttggagggtccagacttcttcgtgccaatcttttgcagcctttaaaa
gatattgaaactataaatgctcgtctagattgcctggatgagctcatgagcaacgaacag
ctgttctttggactagctcaggttctgcgtaaatttccaaaagagagtgatagggtgctt
tgtcacttttgcttcaagccaaagaaaattacaaacaaagttgtgggtgttgattgtgct
agaaaaagccaagtgttggtttcaagtatcattcttctgaagactgctctagatgccttg
cctttactctcaaaggttcttaaagatgcaaagtgttttcttcttgcaaatgtttaccag
tctgtatgtgaaaatgagaagtatgctgccattagaaagaggattggagaggttattgat
gaggatgtgcttcatgcacgggtttcatttgtagcccgcacacagcagtgttttgctgtc
aaagctggaatcgatggactcttggatattgcacggagatcattttgtgatactagtgaa
gctatacataatcttgctaacaagtatcgtgaagatttcaagttgcccaatttgaaactc
ccgtttaacaataggcaagggttctactttagcatgccacataaggacattcaagggaaa
cttcctagccagttcattcaggtattgaaacatgggaataatatacactgctcaaccttg
gagcttgcttctctaaacgttagaaataagtctgcagctgcagaatgctacttacgtaca
gaagtttgcctagaagaattagtagatgccatacgagaggatgtttctgcactcacactg
ctggcagaggtcttatgccttttggatatgattgttaattcatttgcacatgccatttcc
acaaagcctgctgatcgttatactagacctgaattcacagataatggcccactggcaatt
gatgctggaagacaccctatcctagagactatacacaatgactttgttcccaacaatatc
tttttatcagaggcatcaaacatggtgctcatcatgggcccaaacatgagtggaaagagc
acttatcttcaacaagtgtgtcttatagttattcttgctcagatgggttgctatgtacct
gctcgctttgcaactctaagggttgttgatcgtatatttacaaggatgggtgcagtagat
aatcttgaatcgaactctagtacgttcatgacagaaatgaaagaaacagcttttatcatg
caaaatgtctcccagaggagtttggttatcatggatgaacttgggagggccacatcttcc
tctgatggatttgcaattgcttggagctgctgcgaacatttattatcactgaaagcgtac
acaatatttgccactcatatggagaacctatctgaactagtaaccatctacccaaatgtg
aagatacttcactttgacgttgatattaaaaataatcgtttagagttcaagtttcaactg
aaggatgggccgagacatgttccacactacggccttctattagcagaagtggcaggatta
ccaagctccgtgatggaaacagccagaaacatcacatccaggatcacagagaaggaagtg
aagaggatggaagtaaactgcctgcaataccatccagtccagatggcttaccacgttgtg
cagcggctgatatgtttgaagtactcgagccaggatgaggattcgatcagggaagcacta
cataatttgaaagagagctacattcatggaatgctgtag

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