KEGG   Malus domestica (apple): 103433334
Entry
103433334         CDS       T03194                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103433334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103433334
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     103433334
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  HECT type E3
   103433334
SSDB
Motif
Pfam: HECT Arm ARM_ARMC5 UTP15_C mTOR_dom
Other DBs
NCBI-GeneID: 103433334
NCBI-ProteinID: XP_008369803
LinkDB
Position
04:complement(join(18862839..18862904,18863005..18863088,18863186..18863314,18863401..18863469,18863549..18863629,18863742..18863846,18863932..18864162,18864269..18865444,18865760..18866933,18867013..18867134,18867222..18867374,18867625..18867786,18867877..18868035,18868119..18868235,18868325..18868474,18868548..18869180))
AA seq 1536 aa
MESRGQKRTELDDELPADKRVCNSMEFRASSSNSSAQTHMNSVNSTPETNGHDMDTSSSA
SANSRSEGERERDSAYGSCDSDDADERHSELKDYQRRRSSGDHGKFKRFISSLSEETDPS
GQLAVLTELCEFLSFCTEDSLSGMTSDSLSPLLVRLARHETNPNIMLLAIRAITYLCDVY
PHSSGFLVRHDAVPALCDRLMAIEYLDVAEQNGVAWDSFTVFMQCLQALEKMSQEQPLEC
LQSGAIMAVLNYIDFFSTSIQRVALSTVVNICKKLPSECPSPVMEAVPILCNLLQCEDPQ
LVENVAVCLIKITERVSESTEMLDELCKHGLIRQVTHFMSLNTRPTVSQLISNGLMGVLV
KLSSGSVVAFRTLYELNISSILKDILSTYDLSHGMFSNHVVDGHCNQVYEVLKLLNELLP
TSTRDQENPQLSDKESLLVNQPDLLQKFGMDILPLLIQVVNSGANLYICYGCLSVIDKLI
YLSTPGMLVELLQKANISSFLAGVFTRKDPHVLILALQIAELILQKLSDYFLDSFIKEGV
FFAIDELLTPDKCQLVTLEKCSRLLFPVSSGSQILLDPRQKSASSEVLRCLCYAFATDKS
PSVSEKGSCMLEKDSVYNLAKHIRTKYFAQELCDPEKALTDVLQKLRKCSSALSDLTMSM
NDDALDQHEERFYSIMHQVMEKLGGGEPISTFEFIESGILRSLMTYLSNGQYLKQKGELS
SGNSDIYSVEKRFEVFARLLFSPLDMIPADLPTITLIRKLQNALSSLENFPVILSHVPKI
SSYATVPHGRRTPYPCIEVRFVKDKAETCLCDYCEDVLTVDPFSSLHAIEEFLWPKVNAK
TTGHINSPTQVNDQSESPLDQSPSNACSSQGRSPHPMEPESMSTDLPELQEPVEREAQCP
SEEDTEMEEQYPASFSNEDSSSKLLLYLEGQQLEPSLTLYQAILQQQMKEHEIVIGSKLW
SQEYTLTYRKAEGHHGTRTESSAEKAGVHELYTSFFSSMFAHELASDLDKSSPIYDIIYI
LKSLEGMNKFIFHLISRERICAFAKRKIDDLDNFQTAAIPVPQNEFVSKKLTEKLEQQMR
DTLAVSVGGMPLWCNQLMESCPFLFSFEVKCKYFRLVAFSPLLVQPHSPSYRDSGVTSDR
RPSSGSMPRKKFLVFRNQILDSAAQMMDLHASQKVLLEVEYSEEVGTGLGPTLEFYTLVS
HEFQKSGLGMWREDHGSFASGDGNTGILICPFGLFPRPWLATSDEVIKKFVLLGQIVGRA
LQDGRVLDVHFSKAFYKLILGKELGVYDILSFDPELGKTLLEFKALVDRKRFSESVPGGS
TTLEFDSCFRKTQIEDLCLDFTLPGYPDFVLSSRPDHKMVNMTNLEDYVSLVADTTVHAG
ISRQVEAFRSGFNQVFPIEHLQIFTEEELERLLCGERDSWAFNELLDHIKFDHGYTVSSP
PIINLLEIIHKFDHEQRRAFLQFVTGAPRLPPGGFASLSPKLTIVRKHSGNCEDLDLPSV
MTCANYLKLPPYSSQETMREKLLYAITEGQGSFHLS
NT seq 4611 nt   +upstreamnt  +downstreamnt
atggagagtcgaggtcaaaagcgtactgagcttgatgatgaattgcccgcagataagcgg
gtgtgtaattcaatggagtttagagctagttcatcgaactcttcagctcaaacccatatg
aattctgtgaactccacacctgaaaccaatggccatgatatggatacttcctcttctgct
tcggctaatagtcgctcagagggagaacgtgagagggattcagcatatgggtcttgtgat
tcagatgatgcagacgaaagacacagtgaactcaaggactaccagagacggagatcttcg
ggtgatcatggaaagtttaagaggttcatatcatctttaagtgaagagactgacccttct
gggcagttagctgtgctcaccgagctatgtgaattcctgtcattttgtacagaggattca
ctatccgggatgacatcagactcattatcaccgcttcttgttagacttgctaggcatgag
actaacccgaatatcatgctattggctataagggctataacttatttatgcgatgtgtat
ccgcattcatcgggcttccttgttaggcatgatgcagttcctgctctttgcgacagacta
atggctattgaatacttggatgtagctgaacagaatggggttgcatgggattcttttact
gtttttatgcagtgcctacaagcattggaaaaaatgtcacaggagcagccacttgagtgc
ttacagtctggggcaataatggctgtcctgaattatatagatttcttttcgacaagtata
cagagagttgccctttctactgtggtgaacatatgtaagaaacttccttccgaatgtcct
tcacccgtcatggaggctgttcccattctttgcaatcttctccagtgtgaggatccacag
cttgtcgaaaatgttgctgtttgcttgattaaaattacagaacgagtgagtgagtctacg
gagatgctggatgaactttgtaagcatgggctgattcgtcaagtcacacattttatgagc
ttgaatacccggccaactgtatcccagctaattagtaatggtttgatgggggtacttgtc
aaactttcttctggttcagttgtagccttcaggacgctgtatgagcttaatattagcagc
atactgaaggatatcttatctacatatgacctctcgcatggaatgttctctaatcatgtg
gtggatgggcattgcaatcaggtatatgaagttttgaaattgctaaatgagcttcttcca
acttcgaccagagatcaagagaatccacagttgtcagataaagaatctcttttagttaat
caacctgatcttctgcagaagtttgggatggatatacttccattgttgattcaggttgta
aactccggtgccaatttatatatttgctatggctgcttatctgttatcgacaagttaatt
tatttgagcacacctggcatgcttgtagaactgcttcagaaggccaacatttcaagtttt
ttggctggagtgtttacacgaaaggatccccatgtgttgatattagctctacagattgct
gagctaatcctgcagaaactttctgattatttcttggactctttcataaaagaaggcgtc
ttttttgccatcgatgaactgttaacaccggacaagtgtcaattggtgaccctggaaaaa
tgctcgaggttgttgttccctgtgtctagtggctcacagattttgttggatcctcgtcag
aagtctgcctcgagtgaggtcttgaggtgcttatgttatgcttttgctactgataaatca
ccatcagtgtcagaaaaaggaagttgcatgcttgaaaaggattctgtttataatcttgca
aagcatataaggaccaagtactttgcacaagaattatgtgaccctgagaaagcgttaacc
gatgtccttcagaagcttagaaaatgttcttctgcattaagtgatttgaccatgtccatg
aatgatgacgctcttgatcagcatgaagaaaggttctatagtatcatgcatcaagtaatg
gaaaagcttggtggaggagaacccatttccacgtttgaatttattgaatctggaattcta
aggtccttaatgacttacctgtccaatggccagtacttgaaacaaaaaggggagcttagt
agtggtaacagtgatatttattctgtagaaaaaagatttgaggtgtttgcaaggctgtta
ttttctcctttagacatgatccctgctgacctgcccacgataacattaatacgcaaactg
caaaatgcgctatcttctttggaaaacttccctgttattttgagccatgtgcccaaaata
agttcttatgctacagttccacatgggcgtcgcacaccatatccatgtattgaagttcgt
tttgtgaaagacaaagcagagacatgcctttgtgattactgtgaagatgttctgactgtg
gaccctttttcctcattgcatgccattgaagaatttctgtggcctaaagtcaatgcaaaa
acaaccggccacattaattcacctacacaagttaatgaccaatctgaaagtccactggat
caatcaccatcaaatgcatgctctagtcaagggcgaagtccacatcctatggagcctgaa
agcatgtcgacagacttgcctgagttgcaggaacctgtggaaagagaagcacaatgtcct
tcagaggaagacactgagatggaagaacagtatcctgcatcatttagcaatgaagattct
tcttcgaaactgttactttaccttgaagggcaacagctggagccgtcattgacattatac
caagcaattctacaacaacaaatgaaggaacatgaaattgtcattggttcaaaactgtgg
agtcaagaatacacattaacatacagaaaagctgaaggtcatcatggtacacgtacagaa
agttctgctgagaaagctggggtacatgagttgtacacttcatttttctccagcatgttt
gctcatgagcttgcttctgacttggataagtcaagtcctatttatgatataatatatatc
ctcaaaagcttggaaggcatgaataagtttatatttcatctgatatctcgagaaagaata
tgtgcttttgctaaaaggaaaatcgatgacttggataattttcagacagcagctattcca
gtgccacagaatgagtttgtgagcaaaaaattgacagaaaaactggaacaacagatgcgg
gatactttagcagtgtccgttggtggtatgcctttgtggtgtaatcagttaatggaatcg
tgtccctttttatttagttttgaagttaaatgtaagtacttccgcttggtggcatttagt
ccactgctagttcagcctcattcaccatcttatagggattcaggggtgacaagtgacagg
cgaccaagctctggaagcatgcctcgaaaaaagtttttggttttccgcaaccaaattttg
gattctgctgcccaaatgatggacctgcatgccagtcagaaggtactccttgaggtggaa
tacagtgaagaagttggtactggccttggtccaaccttggaattctataccctggttagt
catgagtttcagaagtctggtctaggcatgtggagagaggatcatgggtcttttgcctct
ggtgatgggaatactggaattttgatatgtccttttggtcttttccctcgtccatggttg
gctacatctgatgaagtaattaagaagtttgttcttttggggcaaatcgtaggtagagcg
ctccaagatgggcgggtcttggatgtgcatttctccaaagccttctataagcttattctt
ggcaaggagcttggtgtgtatgacatcctgtcatttgatcctgagcttgggaagacactg
ctagagtttaaggctctagtagacaggaaaagattttcggaatctgttcctggaggaagt
acaacattggaattcgactcatgctttcggaaaacccaaattgaggatctttgtcttgat
tttacacttcctggttatcctgattttgttctttcctctcggcctgatcataaaatggta
aatatgacaaacttggaagattacgtctcacttgttgcggatacaacggtacatgctggt
atttctagacaagtggaagctttcagatctggttttaatcaggttttccctattgaacat
cttcagattttcactgaagaagaattagagcgtttgctatgtggagaacgtgattcttgg
gctttcaatgagctccttgatcatatcaagttcgaccatggttacacagttagcagtcct
cccattatcaatttgctggaaatcatacacaagtttgaccatgaacagcgaagagcgttt
ctgcaatttgtgaccggggcacctcgcttacctcctggaggttttgcatctctcagtccg
aagttaactattgttcgaaagcactctggcaactgcgaagacttagacctcccaagcgtg
atgacttgtgcaaattatcttaagctaccaccttactcttcgcaagagacgatgagagag
aagctcttatatgccattacagaagggcagggatcattccacctttcatag

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