KEGG T03194: 103433335

Malus domestica (apple): 103433335

Entry

103433335         CDS       T03194

Name

(RefSeq) probable DNA helicase MCM8 isoform X1

K10737

DNA helicase MCM8 [EC:5.6.2.4]

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103433335
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103433335
Enzymes [BR:mdm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103433335
DNA replication proteins [BR:mdm03032]
Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    103433335
DNA repair and recombination proteins [BR:mdm03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     103433335

SSDB

Motif

Pfam:

MCM WHD_MCM8 MCM_OB MCM_lid AAA_5 Mg_chelatase AAA_3 MCM8_N Sigma54_activat AAA_16 AAA

Other DBs

NCBI-GeneID:

103433335

NCBI-ProteinID:

XP_008369806

LinkDB

Position

04:join(18852229..18852414,18852593..18852851,18852947..18853169,18853253..18853416,18853630..18853893,18854312..18854407,18854506..18854658,18855152..18855222,18855302..18855420,18855687..18855816,18856052..18856103,18856239..18856395,18856506..18856680,18856954..18857124,18857209..18857322,18857477..18857530)

AA seq 795 aa
MYGAQRRSLSSNYGSSYAPDLHTIWPLYFAQIELGDDKPWLSLTHSLIGFFSTTPGQALL
SQVKDDGGVAVLPIDFEQFRKICDVEEFYEALEEKPKITLLCMSAAVHKVLLTQWDNCRV
EDGTKINIRLHNYPESMIALKNLKAACIDKIVSVRGTVVKVSNVKPFVVQMDFDCVKCKT
SITRMCPDGKFSPPTTCDLNGCKSRNFDPIRSTAVTIDFQKIRIQELLKPEDHEEGRMPR
TVECELFEDLVDACIPGDVVTLTGIIRVINNYMDIGGGKSKGKTQGIYYLYLEAISIKNT
KSQSMPEDLQDSSSNDRPMALVDLSSFSPRDLEFIVKFTEEHGPDTFRQLLQSICPSIFG
HELVKAGILLALFGGVRKNSNDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAISPRGIY
VCGNATTKAGLTVAVVKDPMTSDYGFEAGAMVIADSGLCCIDEFDKMSSEHQALLEAMEQ
QCVSVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKISAALLSRFDLVFILLDK
PNELLDKRVSEHIMSLHAGSRENSPAAKKIRRASQSAEGIDISGEGGSLVSRLRLDPKKD
EDFVPLPVQLLRKYIAYARTFVFPRMSKPAAEILQKFYLKLRDHATSADSTPITARQLES
LVRLTEARARLDLREEITAQDAMDVVEIMRESLYDKYIDEHGVVDFGRSGGMSQQKEAKR
FLSALNRQSELQQKDCFTISEIYSLADRIGLRVPDIDTFVDNLNSVGYLLKKGAKTYQVL
SSSYSRSQSSSRSRG

NT seq 2388 nt +upstreamnt +downstreamnt
atgtacggagcacaacggagaagcttaagctcgaactacggctcctcctacgcacctgat
ctccacaccatctggcctctctactttgctcaaatcgagctcggcgacgacaagccatgg
ctcagtctcacacactccctcatcggcttcttctccacgacgccggggcaagctctcctt
tcccaggtgaaggatgatggtggtgtggcggtgttgccgattgatttcgagcaatttcga
aaaatttgtgatgttgaggagttttatgaagctttagaggagaaacccaagataaccctc
ttatgcatgagtgctgcagttcacaaagtcctgctgactcaatgggacaattgcagggta
gaggacggtaccaaaattaatattcgattgcataactaccccgaatccatgattgccttg
aagaacttaaaagctgcatgtattgacaagattgtatctgtgcgtggtacagtagtaaaa
gttagcaatgtcaaaccttttgtggtgcaaatggattttgactgtgtgaagtgtaaaaca
agtattacacgcatgtgtcctgatgggaaattttcaccgccaacaacatgcgatctaaat
gggtgcaagagcagaaattttgaccccattcgatctactgctgtgacgatagattttcag
aagataaggatacaggagctactaaagcctgaagatcatgaagaaggcaggatgcctcga
acagtagaatgtgaactttttgaagatcttgttgatgcatgcatcccaggagatgtggtg
actctcactgggattataagagtcattaacaattacatggacattggaggaggcaaatcg
aagggaaaaactcaaggaatttactatttgtatctagaagctatttccattaaaaacaca
aagtcacaatctatgcccgaggatttacaagattctagttctaatgacagacctatggca
cttgttgatctttcctcattttccccaagggatttggaattcattgtgaagttcacagag
gaacatggtccagataccttcaggcaactacttcaatctatttgtccatcaatctttggt
cacgagcttgttaaagcgggaatattgctggcactctttggaggtgtgcggaagaattca
aatgatcagaacaaggttcctgttagaggagatatccatgtcataattgttggtgatccc
ggactaggcaagagccagcttctccaagcagcggcagccatttctccacgaggcatttat
gtgtgtggtaatgccacaaccaaagctggcctcactgttgctgttgtaaaggatcctatg
acaagtgattatggttttgaagctggtgcaatggtaattgcggacagtgggttgtgctgt
attgatgagtttgacaaaatgtcttcagagcatcaggctctactggaagccatggaacaa
cagtgtgtctcagtcgcaaaggctggactggtggcaagtttgtcggcacgaacttctgtc
ttagcagctgcaaatcctgttggtggtcattataaccgtgcaaaaacagtgaatgaaaat
ttgaaaataagtgctgctctcttatcgcgatttgatttggttttcatattacttgacaaa
cctaatgaacttttggataagcgagtctcagaacacatcatgtcacttcatgctggatct
agagaaaattcgccagctgcaaaaaagattcgtagagcatcacagagtgcggaaggcata
gatattagtggagaaggtggttctttggtttcaagattgaggcttgacccgaagaaggat
gaggattttgttccattaccagtacaactcctccgcaagtatattgcttatgcaagaact
tttgtgtttcctaggatgtcaaagcctgcagcagaaatcctgcaaaagttttacttaaaa
ctgagagaccatgcgacatctgctgatagcacaccaataacagcaaggcaattagagagt
ctggtgaggctgaccgaagctcgagcgaggctagatttgagagaagaaataacagcccaa
gatgcaatggatgtggttgaaatcatgagagaatccttgtatgacaagtacattgatgag
catggtgttgtggattttggtcggagtggagggatgagtcaacaaaaagaagcaaaacgg
ttcttaagtgccctcaataggcaatcagagttgcagcagaaagactgttttacaatttct
gaaatatacagtttggcagataggattggtctaagagttccagacatcgacacatttgtt
gacaacttaaacagtgttggttatctactgaagaaaggagcaaagacataccaggtacta
tcatcgtcttattctcggagtcaatcgtcctcaagatcaagaggctaa

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