Malus domestica (apple): 103433587
Help
Entry
103433587 CDS
T03194
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103433587
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103433587
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103433587
Protein phosphatases and associated proteins [BR:
mdm01009
]
HAD phosphatases
Fcp/Scp phosphatases
103433587
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103433587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DUF3708
Motif
Other DBs
NCBI-GeneID:
103433587
NCBI-ProteinID:
XP_008370073
UniProt:
A0A498JZQ1
LinkDB
All DBs
Position
04:complement(join(23376160..23376265,23376730..23376800,23377449..23377597,23377698..23377794,23378266..23378319,23378435..23378568,23379427..23379484,23379602..23380744,23381341..23381811,23382104..23382373))
Genome browser
AA seq
850 aa
AA seq
DB search
MSRLGFKSVVYHGELRLGELDAIPVTDGNFRFPNNEIRIHRISQQSERCPPLSILQTISS
FSVRCKLESASPVEQPHLINLHASCFYEFKTAIVLVGDEEIHLVAMPSKQKKFPCFWCYA
VPVGLYSASLGMLNLRVLSIVFDLDETLIVANTMKSFEDRIEALRSWIGRESDGVRIAGM
SAEMKRYMDERWLLKQYIDNDCVMDNGKLYKVQLEEVPPLSDNHEKMIRPIIRLPEKNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGS
HLIGSKQLLDRVVCVKSGSKKSLLNVFQQGVCHPKMAMVIDDRSNVWEDKDQPRVHVVPA
FSPYYAPQAETASAVPVLCVARNVACNVRGCFFKEFDEILLRRISGVFYEDEVVNLPPAP
DVSNYLMSEDAGFAPNGNANAPISEGMNGVEVERRLNLSDDKGGVESVVHSVKNHAESRS
DNSQALAAILPNAAGTTSLRPVIPSQKPGLLGLPVRRDSFSDRDHEMRRGLLGTNPGLDI
RSQSSAEPPLLSKVPGQLPASSINAQGGWLVDDDNNRGHSSNHTSELVQQPGVSKPEKSV
YQNPFGPATPGSTPTGLLSHKSDLKREEVSSGRDLQKQNLPFPSQPSEAGVSQNQASSLN
RESQIESGKVTLLPSPLSIGVLQEIGRRCSSKIEFRSVLSTSNDLQFSVEVLFTGEKIGF
GTGRTRKDAQQQAAENALHSLADKYAAYLAPHTGVVDRDLDKGNENGFLLDMVGPGSAEL
LRDGLPTESTSEAVEVEPGSTFTVSQQVLKRASSPRLIESVAKRSKEEILHGSRSLSFSR
QQKNGVTDKL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttagggttcaagtccgtagtctaccatggcgagctgcgtttgggagagctg
gacgctattccggtgacggacgggaatttccggttcccgaacaatgagattcgaatccac
cggatttcgcagcaaagcgagaggtgtcctccgctctcaattctccagacgatttcctcg
ttttctgttcgctgcaaactcgaatcggcctcccctgtcgaacagccgcatttgatcaat
ctccacgcctcttgcttctacgagttcaagacggcgattgtgttggtaggggatgaggag
attcacttggtagccatgccgagtaagcagaagaaatttccgtgcttttggtgctatgcg
gttcctgttggtctgtacagtgcttctctaggaatgctgaatctgagggttctctcaatt
gtgtttgatctcgatgagacgttgattgttgccaacaccatgaagtcttttgaggatagg
atcgaggctttacgaagttggattggacgggagagtgatggggtgcgaatagctggaatg
tctgctgaaatgaagcggtacatggacgagaggtggctgttgaagcaatatatagataac
gattgtgtgatggataatggaaagttgtataaagttcaactggaggaggttcctccactg
tctgataaccatgaaaaaatgattcggcctatcattagattgccagagaagaacattgtg
ctcactcgcatcaatcccgagattcgtgataccagtgtgcttgtgcggttacgacctgca
tgggaagatttgagaagttatttaactgcaaaaggacgcaagaggtttgaagtttacgtc
tgtactatggctgaaagagattatgccttagaaatgtggaggcttcttgacccagggtca
cacttaataggctcaaagcaacttctggaccgtgttgtttgtgttaaatcaggctccaag
aaatctttactgaatgtcttccaacaaggagtgtgccatccaaagatggcaatggttatt
gatgaccgttccaatgtctgggaagataaggatcaacctcgagtccatgttgttccagct
ttcagcccatattatgctcctcaagcagagacagctagtgcagttccagtcctctgtgta
gcaagaaatgttgcatgcaatgtcagaggttgttttttcaaagagtttgatgaaattttg
ttgcgaagaatttctggagttttttatgaagatgaggtggtaaatttgcctcctgctcct
gatgtgagcaattacttgatgtccgaggatgctggttttgcaccaaatggaaatgctaat
gctcccattagtgaaggaatgaatggtgtcgaagtggaacgaagattaaacctatctgat
gataagggtggtgtggagtcggtggttcattctgtgaaaaatcatgctgagtcaagatct
gacaactctcaagcactggctgcaattcttcccaatgctgctggtacgacatctttgagg
ccggtcataccttctcagaaacctggtctgcttggacttcctgttagacgtgatagcttt
tctgatcgtgaccatgagatgaggagaggactccttggtacaaatcctggtctagatata
aggagtcaaagctctgctgagccccctcttttatctaaagtgcctggacaactgccagca
tcctcaataaatgcacaaggaggatggttggttgatgatgacaacaacagaggacattcg
agtaatcacacttctgagcttgttcaacagcctggtgtttcaaaacctgaaaagtcagtt
taccagaatcctttcggtcctgccacaccaggttctacacccactggtttgctctcacac
aaatccgatttgaagagggaagaggtatcttctgggcgtgatttgcaaaaacagaatctt
ccttttccaagtcagccttcagaggctggtgtatcccagaatcaagcatcttctttgaat
agagaatctcaaatagaatctggtaaagtgaccctgctgccatcccctttatctattgga
gtgctgcaggaaattggacggaggtgcagttcaaagattgagttcaggtctgttttaagc
accagcaacgatttgcagttttctgttgaggttcttttcactggagagaagataggtttt
ggaacgggtaggacgaggaaggatgctcaacaacaggctgctgagaatgcccttcacagc
ttggctgataaatatgctgcatatcttgcacctcatactggtgtcgtggacagagattta
gataaaggaaacgaaaacggatttctattggacatggttggtccaggatcagctgagcta
ctaagggatggattgcctacagaaagcacttctgaggctgttgaagttgaaccggggagt
acttttacggtgagtcagcaagttctaaagcgtgccagttccccaagattgatagagtct
gttgcaaaacgatccaaggaagaaatactgcatggttcacgaagtttatcattttcacgg
caacagaagaatggggttacagacaaactttga
DBGET
integrated database retrieval system
