Malus domestica (apple): 103433782
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Entry
103433782 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103433782
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103433782
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103433782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
zf-ANAPC11
Caps_synth_CapC
DUF1451
zinc_ribbon_16
zf-RING_10
zf-Nse
Sina_RING
Motif
Other DBs
NCBI-GeneID:
103433782
NCBI-ProteinID:
XP_008370292
LinkDB
All DBs
Position
04:join(26268470..26269106,26269457..26269533,26269640..26269808,26270320..26270408,26270626..26270790,26270917..26270994,26271591..26271694,26271899..26272004)
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AA seq
474 aa
AA seq
DB search
MEGSGGNLDSFRASPGSSSNRRYGVLSASNIIQAPISTLLEYWGILRGRTNHQEGESLIN
GRSAAAFRDHRHSQLDQSPTTTSNDGEVSIRIIGAGEQEHDREGPGIVAGQLREVTAPPN
DVSVPPMAGAASVALGTEEVGQTDGRTDRSSGEGIPQSLNESAAGEGGDGSGANGRDSSY
QRYDIQQAARGIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAVVMFKSNDILKKQTALKGE
RKIAVLIGISLAFVLHVVGVYWWYQNDDLLHPLIMLPPKVIPPFWHAVFIIMVNDTLVRQ
AAMVLKCFLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF
SSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKM
HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtcgggtggcaatctggactcgtttagagcttctccgggaagcagtagtaat
aggcggtatggggtgttatcggcttccaatatcattcaggcgccaatttctaccttgttg
gagtactggggtattctccgcggccgcactaatcaccaagaaggcgagtctttgattaac
gggcgtagtgctgctgcgtttagggatcaccgtcatagtcagctagatcagtcaccgaca
acgacaagcaatgatggggaggtttctattaggataattggtgcaggggaacaggagcat
gatagggaaggacctgggatagtagctggacagttgagggaagttactgcaccgccaaat
gatgtttctgtaccaccaatggctggggcggcctctgtagcattgggaacggaggaggtg
ggtcagacagatggcagaacggatcgtagttcgggagagggaattccccaatcgttaaat
gaaagtgctgctggagaaggaggtgatggatctggggctaatggcagggattcttcttac
cagagatatgacattcagcaggctgctagggggattgaacaagtcctgcccttttccttg
cttctattggtggtcttcatccgccagcatttgcaaggtttctttgttacaatttggatt
gctgtcgttatgttcaagtcaaatgatatattaaagaaacagacagctttgaagggagag
aggaaaattgcagttctaataggcatttctcttgcattcgtgttgcatgtggttggtgtt
tactggtggtaccagaatgacgatcttttgcatccattaattatgcttcctcctaaagtt
ataccacccttctggcatgctgttttcatcatcatggtgaatgacaccttggtccggcag
gcagcaatggtgctgaagtgttttctattaatgtactacaaaaacagtagaggccgaaac
tatcgtaagcagggtcaaatgcttactctggttgagtatctactgctcttgtaccgtgcc
ttgttgccaacaccagtgtggtatcggttcttcttgaacaaagaatatgggagtctcttt
tcgtcactaatgacagggttatatttgactttcaagctcacatctgttgttgagaaggta
caatccttctttgctgcattgaaggcattgtcacgtaaggaggtgcactatggggcatat
gcaacatcagaacaggtcaatgcagctggcgatttatgtgctatttgccaggagaagatg
catgctcctatcctactgcgatgtaaacacatcttttgtgaggactgcgtatcagagtgg
tttgagagggagcggacgtgcccgttatgcagagctttggttaaacccgcagatatcaga
tcattcggcgatggatcaacgagtttgtttttccagctgttctga
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