Malus domestica (apple): 103433892
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Entry
103433892 CDS
T03194
Name
(RefSeq) pre-mRNA-splicing factor 38 isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103433892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103433892
Spliceosome [BR:
mdm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103433892
Complex C
U4/U6.U5 tri-SnRNP related factors
103433892
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
103433892
NCBI-ProteinID:
XP_008370404
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All DBs
Position
4:complement(28562894..28566370)
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AA seq
376 aa
AA seq
DB search
MANRTDPSAKSIRGTNPQNLVEKIVRTKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGTDTDVYQYL
EPLYNDYRKLRRKLPDGNFTLTHVDEVIDELLTNDYSCDIAMPRIKKRWTLEATGSLELR
KSALEEDFEEEEEKEENVQVDGMDEDVHDRDYYHDRSPARERERDRRRDSHRYRDRDYGR
DYDRDRDYDREHGRWRERDRDRDRDRDRDHDRLRDEKDYGRDRDRDRERDWDRRERDRGR
RRSRSRSRSRSRDRDGGDRDRKRHARSISPRRPDREEPKKKKEKKKEKKDDGTDHPDPEI
AEANRLRASLGLKPLK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggacccgtcggcgaagagcataagggggacgaacccgcagaacctg
gtggagaagatcgtacggacgaagatataccagaacacgtactggaaggagcagtgcttc
gggttgacggccgaaacactagtcgacaaagccatggagctcgaccacatcggcggcacc
ttcggcggcaaccggaagcccacgcctttcatgtgcctcgtcatgaagatgcttcagatc
cagccggagaaggagatcgttatcgagttcataaaaaatgacgattacaagtacgttcgg
atactcggtgcattttatttgcggcttacgggaactgatactgatgtctaccagtaccta
gagcctttgtataatgactatcggaagttgaggaggaaactgcctgatgggaattttacc
ttgacgcatgtggatgaggttattgatgaacttctcacaaatgattactcatgtgacatt
gcaatgccacgaattaaaaaaagatggactctcgaagcaactggttcattggaactcagg
aaaagtgctttggaggaggactttgaggaggaggaagagaaagaggagaatgttcaagtt
gatggaatggatgaagatgtccatgatagggattattatcatgaccgaagccctgccagg
gaaagggaaagggatagaagacgcgacagtcacagatacagggaccgagattatggcaga
gactatgatagggatagagactatgacagggaacacggacggtggcgtgaaagagatagg
gacagagacagggatagggatcgggaccatgatcggctgagagatgaaaaggattatggt
cgtgatagggatagggatcgggaaagggattgggacaggcgagaaagggatcgtggcagg
aggaggagccgttcaagaagcagaagtcgtagtagagatcgtgatggtggagatagagat
cgcaagagacacgcccgcagcattagtcccagaagacctgatcgtgaggagccgaagaag
aagaaagaaaagaagaaggagaagaaggatgatggcacagaccatccggatccagagatt
gctgaagcaaacagactccgagcatctcttgggttgaaacccctgaagtag
DBGET
integrated database retrieval system
