Malus domestica (apple): 103434201
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Entry
103434201 CDS
T03194
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103434201
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103434201
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103434201
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103434201
03041 Spliceosome [BR:
mdm03041
]
103434201
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103434201
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
103434201
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103434201
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103434201
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103434201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
103434201
NCBI-ProteinID:
XP_008370734
LinkDB
All DBs
Position
04:join(30328294..30328468,30330089..30330648,30331000..30331275,30331983..30332000)
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AA seq
342 aa
AA seq
DB search
MDQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSKEIFLQQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLD
QIRNLQRPTDVPDTGLLCDLLWSDPSKDVHGWGGNERGVSFTFGPDTVTEFLQKHDLDLI
CRAHQVVEDGYELFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKPK
FNFGSMTAAKPGNTSSGVGAFASIAAAKPGNTVTGIKSLMHR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatcggttctggacgacataatcaaccgactcctcgaagtccgaggccggccc
gggaagcaggtccagctgtcggagtcggagatccggcagctttgtttggtctctaaagaa
atcttcttgcagcagcctaatttgttagagctcgaagcacccatcaagatttgtggtgat
atacacggtcagtactcggatcttttaaggcttttcgagtacggtggactgcctcctaat
gccaattacttgttcttgggggattatgtggatcggggaaagcaaagtttagaaacaata
tgtcttctccttgcatataaaataaaatatcctgagaattttttcctcttgaggggaaac
catgaatgtgcatctataaaccgtatatacggattttatgatgagtgtaagagaagattc
aatgtgaggctatggaagacattcacagagtgttttaactgccttccagtggcagctctg
attgatgaaaagattctctgcatgcatggtggtctttctcccgacctgcataatttagat
caaatcagaaatttacagcggccaacggatgtaccagacacaggtttactttgtgacctt
ctctggtctgatcccagtaaagatgttcatggttggggagggaacgagcggggagtttcg
tttacatttggtcctgacacggtgacggagtttcttcagaagcatgatttggatctcatt
tgtcgtgctcaccaggttgtggaggatggctacgagttatttgccaaccgacaacttgtg
acgatattttcagcacctaattattgtggggaatttgataatgctggtgccatgatgagt
gtggatgagacattaatgtgctcttttcaaatattaaaacccgcagagaaaaagccgaaa
tttaactttgggagcatgactgcagctaagcctggaaatacttcatctggagttggtgct
tttgcgagcatagcagcagctaagcctgggaacactgttacaggaatcaagtctctgatg
cacaggtaa
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integrated database retrieval system
