| Entry |
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| Name |
(RefSeq) ATP-dependent RNA helicase DEAH13
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| KO |
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| Organism |
mdm Malus domestica (apple)
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| Brite |
KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:mdm03009]
103434251
Enzymes [BR:mdm01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103434251
Ribosome biogenesis [BR:mdm03009]
Eukaryotic type
90S particles
Helicases
103434251
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
04:join(31111817..31111906,31112008..31112085,31112165..31112239,31112343..31112392,31112501..31112561,31112648..31113052,31113465..31113710,31113818..31114048,31114699..31114812,31114899..31116137,31116622..31118079)
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| AA seq |
1348 aa
MELCLGDGGVDSNALVLPAKRRNKRKGTNQECGKPNKRRKAPTVSKSQRRRLKKLEGSGK
PNKSKAPMVSKSQQRKLKKLEDEKEKALSISKSIEALEKYELPEAAYSLLQSSKNIGKVE
SKKEKRQKAVLFSKAGFEAFMTDPQPFNKVDSDQTSSESEPEVEKTQSRRDIGKNDLVQS
KILQKEIQKKTSFSLDSSQGQVCGRGQGVNGGTAAASSVITNAISNKLEMSLQQDTNISP
TSCVNGDNEISKTDHIKETPKANVSRVSKSSISPALRPLISPTIVHVSRPEEVENTRKDL
PIIMMEQEVMEAVNDHSTVIICGETGCGKTTQVPQFLFEAGFGSSSSSVRSGIIGVTQPR
RVAVLATAKRVAYELGLHLGKEVGFQVRYDKRIGESCSIKFMTDGILLRELQNDFLLKRY
SVIVLDEAHERSLNTDILIGMLSRVIRTREERYAEQQKEMLSGRTISPDQRIFPLKLVLM
SATLRVEDFISGKKLFHDPPPVIEVPTRQFPVSIHFSKRTKEKDYIEQAYKKVLAIHKRL
PRGGILVFVTGQREVEYLCQKLRRASKAQIIKTSKGDNRSDASAVSEINSAEEIDMKEIN
EAFEIHGSSEGHQTDRFSSIDEDQYDIDEDELDASYDSETGSELESFGEDGDSLFHDIPE
NDSNVSEVLGEEGGIASLKAAFEALAGKTSLNSNSDVKEPISDTVDSCYNPPNPSMGKKC
RFEDNNSPGALHVLPLYAMLPAAAQLHVFEEVKEGERLVVVATNVAETSLTIPGIKYVVD
TGKEKVKNYNSSSGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAAYSNIFPDFS
LAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPDGAALDEAERCLKILQALDKGGRLTPL
GRAMAHYPMSPRHSRMLLTVIQVLSKKKSSGANLVLAYAVAAAAALSLSNPFVRQFEDSH
KESHELNEDGNIKVIDKLEKLGRKKLKETVKMFREKFSNPSSDALSVAFALQCYELAESP
VEFCNANGLHPKTMEEMSKLRKQLLQLVFNQSGVCGGENDFSWTFGSREDVEHVWRVSHG
KNPLSLYEEELLRQAICAGWADRVAKRIRGSSVSSEGDRKVHAVRYQACLLKERVFLHRW
SSVSNSAPEFLVYSELIQTRRPYMHGVTSVKTEWLVEYARSLCTFSAPPTDTKPYYEPLN
DRVLHYVIPAFGPHLWELPLHADPIEDHKDRVSVFAYGLLNGQVLPCLRCVVESMAAPPA
TVLRPEAAGQARVGNLLAKLRVKKIDSCAMLRKVWKENPSELKTEMLDWFQESFRRKYFE
TLWSQMHVEVLLEPQERFPKTRRRGEQK |
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| NT seq |
4047 nt +upstreamnt +downstreamnt
atggaactctgcttgggagatggcggggtagatagcaacgccctcgtattgccagccaag
agaaggaacaaaaggaagggcaccaatcaggagtgtggaaaacccaataaaagaagaaaa
gcgccaacggttagcaaatcccagcggaggaggctcaagaagttggaggggagtggaaaa
cccaataaatcaaaagcaccaatggttagcaaatcccagcagaggaagctgaagaagttg
gaggatgagaaggaaaaagccctttcaatctccaaaagcattgaggccttagagaaatat
gagcttccagaggctgcatattctcttctgcagtcttcaaagaatattggcaaggttgag
tctaaaaaggagaaacgtcagaaggccgtactattttccaaagctggctttgaagctttc
atgactgacccccaaccatttaacaaggtagatagtgaccaaacttctagtgaaagtgaa
cctgaggtagaaaaaactcaatcaaggcgggatattggcaagaatgacctggtgcagtcg
aagatattacaaaaagaaatccaaaagaagacatctttttcattggactcatctcagggt
caagtttgtggcagagggcaaggcgtcaatggcggaactgctgctgcctcatcagttatt
acaaatgctattagcaacaaacttgaaatgtctttgcaacaagatacaaacatttctccc
acttcatgtgtgaatggtgataatgaaatatcaaagacggaccacataaaagagacacca
aaagcaaatgtcagcagggtgagtaaatcatcaatttctcctgcactgaggcctctaatt
tccccaaccatagtccatgtatcaagacctgaggaagttgaaaacacaaggaaggatctc
cctataataatgatggagcaggaggtaatggaggctgttaatgaccattccactgttatt
atatgtggagagactggttgtggtaaaaccacccaagttcctcagtttctttttgaagct
ggctttggttctagctcctcttctgtacgaagtggtataattggtgttactcaacctcgc
cgtgtggcagtccttgctactgctaagcgtgtggcatatgagcttggtcttcatttaggt
aaagaggttgggtttcaagttaggtatgacaaaaggattggtgaaagttgctccatcaaa
ttcatgacagatggaatattactacgggaacttcagaatgactttttgttgaagcgatac
tctgtcatagttcttgatgaggctcatgagcggagcttgaacaccgacatacttattgga
atgctttcacgtgtaattcgtactcgcgaggaaagatatgcagagcagcaaaaagaaatg
ctttcaggaagaactataagtcctgatcaacggatttttccattgaaacttgttctgatg
agtgccaccttgcgagtggaagacttcatttctggtaaaaagctttttcatgatccccca
ccagttatagaagttcccaccagacagtttcctgtatccattcacttctcaaagagaact
aaggaaaaggattatattgagcaagcatataaaaaagtcttggcaattcacaagaggctg
ccacgtgggggcatacttgtctttgtcactgggcagagggaagtagagtacttgtgccaa
aaactgcgtagagcttcaaaggcacagattataaaaacatctaaaggagataacaggagt
gatgccagtgcagtttctgagataaattctgctgaggaaatagacatgaaggagattaat
gaagcgtttgagattcatggaagttcagagggccatcagactgatagatttagctctatt
gatgaagatcagtatgatatagacgaggatgagttggatgcctcatatgattcagaaaca
gggagtgaactggaaagttttggcgaggatggtgattcattgttccatgatatccctgaa
aatgatagtaatgtttctgaagttttaggagaggaggggggaattgcttcactgaaagcc
gcttttgaagctttagctggaaaaacttctttaaactccaactctgatgtgaaagaacct
atttcagatactgtagactcttgctacaacccacccaatcctagcatggggaaaaagtgt
cggtttgaagataataattctcctggtgcattgcatgttctccctctttatgcaatgctg
cctgcggcagctcaacttcatgtatttgaagaagtcaaggaaggagaacgtcttgttgtt
gtggccactaatgtggctgaaacctctttaactatacctgggataaagtatgttgtcgat
actggaaaagagaaagtgaagaactacaattcctcaagtggcatggaaacatatgaagta
cagtggataagtaaggcatcagctgctcaacgtgcaggaagagcgggaagaacggggcct
ggccactgttaccgtctgtattcttctgcagcatatagtaacatatttcctgacttttct
ctggctgaaatatctaaggtccctgtggatggtgttgtccttctcatgaaatccatgaat
attgacaaggtatccaattttccatttccaactcctccagatggtgctgccttggatgaa
gcagagcgttgcttgaagattcttcaagcacttgacaaaggtggaagactgacacctcta
gggagggccatggctcattaccccatgagtcctcgccactctaggatgctccttactgtt
attcaagtcctgagtaagaagaagagttccggagctaatttagtactagcatacgcagtt
gcagcagctgctgctttgagtttgtcaaatccttttgtcaggcagtttgaagatagccac
aaagaaagccatgaattaaacgaggatgggaacattaaagttatagacaagctagagaag
ttggggaggaagaaactaaaagaaactgtgaaaatgttccgtgaaaaattttctaatccc
agcagcgatgctctgtccgtagcttttgctttgcagtgctatgaacttgcagagagccca
gtggaattctgtaatgccaatggtctacacccgaaaacaatggaggaaatgtccaagctg
agaaagcaactactccagcttgtctttaatcaaagtggtgtttgtggtggcgagaatgac
ttttcatggacttttggaagtcgggaagatgttgaacatgtttggagggtttcccacggt
aagaaccctctttcattgtatgaggaagagctcctacgccaagctatctgtgctggttgg
gcagatagggtggcgaaacgcattagaggaagttcagtgtcatctgaaggagatagaaaa
gttcatgcagttcgatatcaagcctgcctgcttaaagagagagtgtttctccaccgttgg
tcatctgtttctaattcagcccctgagtttctggtatacagtgagttgatacagacaaga
cgtccttacatgcacggtgttactagtgtaaaaacagaatggcttgttgagtatgctcgg
tctctgtgcactttctcggcacccccaacagataccaaaccttactatgagcctcttaat
gaccgagtattacattatgtcattccagcctttggtcctcatttgtgggagcttccacta
catgctgatccaattgaagaccataaagaccgagtatctgtttttgcttatggtttgctg
aacggccaggtgctgccatgtttaagatgtgttgtcgagtctatggcggcccctcctgct
actgttttaaggccagaggcagcaggtcaagcacgcgtagggaatcttttggccaagctg
agagtgaaaaagatagacagttgtgctatgttaagaaaggtctggaaggagaatcccagc
gaattgaaaacagaaatgctagactggtttcaagagagtttccgccgcaagtattttgaa
actctttggtcgcaaatgcacgttgaagttcttttagagccccaagaacgattccccaag
acaaggaggagaggagagcaaaagtga |
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