Malus domestica (apple): 103434303
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Entry
103434303 CDS
T03194
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103434303
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103434303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103434303
NCBI-ProteinID:
XP_028954922
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLEFDEDL
FFGKVAAQVNDGISDGDPQTLGLSVTPLEKHDMYEGIPGTSETIQMNGIENQNDVLAANT
DFVTYAQAPSTPGLFEEPNLFAVQEPMACSDHLDFEDHNLSNLASMGSSENAGCMSGPRC
GDDSTMVSPNENGYHLGDMEIKQTKPQEHELIESISPVLECLNGTVGALDGRNRVEDIHD
GIVINNEPLMPILAQKDAQHAEPAGVRFDETVASPSYSQVTSELDDPARKISSGNSCPRA
SEDYLEDQQTCLKPEIQIDVETANNMEQSCIPSITDPFKPVTHEDTASAEVPVLQACGSL
PSHRDLLSPADKISEIPFNLPSEVVGPSSLDNATSLDNQLENLDRSATSNLPPPEKLLSV
PEGFTSKPSDFLVEPTPEKEVMGGDAGDGDGIKLISGKKRSSTESTLTVQSLNSVESFGE
ARGKRTAESIPDDDDLLSSILVGRRSSVLKMKPTPPAPEMICTKRSRTAARGTASKRKVL
MDDTMVLHGDQIRQQLTNTEDIRRVRKKAPCTRPEISMIQRQFLEDAIFTEPIFTGMSAE
LIYLHTGTFDTSTTRVSENEQNNVSAEPLKDVESSLEPNVTKEIEPLRSTEPVIMRDDSA
AQPAGVPIENENQKEEDHNLRSHHTDAQEQGITDLEEFNTSKHEPLGEIAEMEIDKENFE
GADPIVEDIYKVSADVNVQSRLMDKTDDEDALLQMEALCRSPNNKLDAQPMEVDALIVEA
GIQKEVDAIEVVDRNVEIRADVWIGASELTNNVNVTLSTGESKNLSFSDYQPVEGIGNSE
QHIVNETEVLEANLHCDDNASLNGKESPGCREVDPQSGIDAEVTAVAEDRGDCEDVGFGN
DTEFLNVDDDEITEAVDDMPCAEDTRLLENSGWSSRTRAVAKYLQTLLDKEPAHGKKVLG
MDSLLNGKTRKEASRMFFETLVLKTRDYIHVEQAKPFDNVSIRSRVKLMKSEF
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgttttattctcagtttatattggccaagaaaggtcctcttgggacaatatggatagcg
gcacatttggagcgcaagcttcgcaagaatcaggtcgccgacaccgatattggcgtctcc
gtagattctattctttttcctgaagttccaattgctctcaggttgtccagccatcttctg
cttggtgtggtgaggatatattctagaaaggtgaattacctgtttgatgattgcagtgag
gctttgcttaagataaagcaagcttttcgctccactgcagttgatttacctccagaagaa
tctactgctccgtatcattccatcaccttgcctgagacttttgatcttgatgattttgag
ctaccagataatgaaatttttcagggtaactatgttgatcatcatgtcagtacaagggag
caaataactctccaagacacaatggagggtgtggtttactcgacatctcaatttggattg
gatgagcgctttggtgatggtgatacttctcaaattggtctggaatttgatgaggacctg
ttctttggcaaagttgcagctcaagtgaatgatggaatttcagatggtgatcctcaaaca
ttgggcctatcagtaacacctctggaaaagcatgatatgtatgaggggatacctggaact
tcagaaaccatacaaatgaatgggattgaaaaccagaatgatgtcctagccgcaaatact
gattttgttacgtatgctcaagctccatcaactcctggactatttgaagagccaaacctg
tttgcggttcaggagcctatggcctgcagtgatcacttggatttcgaagaccataattta
tcaaatttagcatccatgggcagctcagaaaatgctggttgtatgtcaggtccgcgttgt
ggggacgatagtacaatggtttctcccaacgagaatggctaccatttgggcgatatggag
atcaaacaaacaaagccacaggagcatgagctgattgaatccatttctccggtattagaa
tgtttaaatgggacagttggtgcattggatggccgaaacagggttgaagatatacacgat
ggtattgttataaacaatgaaccacttatgcctatcctagctcaaaaggatgcacaacat
gcagaacctgctggagttaggtttgatgaaactgttgcatctcctagctactcccaggtc
acatctgagttggacgaccctgctcgtaagattagttcaggtaattcctgtccgagagcg
tcagaagattatttggaagatcagcagacatgtttaaagcctgaaatacagattgatgtt
gaaactgctaataatatggaacaatcatgcatacctagcattacagatcctttcaagcct
gttactcatgaagacacggcatctgctgaagtgcctgtgctccaggcgtgtggctccctc
ccaagtcatcgtgatctgctatctcctgccgataaaatttcggaaatccccttcaactta
ccatctgaggttgtagggccaagttcattggacaatgcaacatctttggacaatcaattg
gagaacttggataggtctgccacttctaacttgcctccacctgaaaagttgctctctgta
ccagaggggttcacttctaaaccaagtgattttctagtggaacctacgcctgaaaaagaa
gtcatgggtggggatgctggtgatggtgatgggattaaactcatctcagggaaaaaacgt
agttccacagaaagtacactgacagtgcagagtttgaattcagttgaatcatttggggag
gcccgaggaaagagaactgcagaatctatccctgatgatgatgatttattgtcttctatt
ttagttggaagaaggtcttcagttctaaaaatgaaacccactccgcctgcacctgaaatg
atatgcactaaacgctcaagaactgctgcccgcggtactgcctcaaagaggaaagtgcta
atggatgatacaatggtcttgcatggcgatcaaatacgccagcagctgacaaatactgaa
gacatacgtcgtgtgagaaaaaaggctccttgtactcgcccagaaatttcaatgattcag
cgacaatttttggaagatgcaatttttactgaacccatatttactggcatgtcggcggaa
ctgatttatctgcacactggaacatttgatacaagtacaacaagggtttccgaaaatgag
caaaacaatgtttctgcagaaccattgaaggatgtagaatcctctctggagccaaatgtt
actaaagaaattgaaccccttcgaagcactgaacctgtaataatgagagatgactcagca
gcacagcctgctggcgttcctattgagaacgaaaaccagaaggaagaagatcataaccta
agatctcaccatactgatgctcaagaacaggggatcactgacctggaagaatttaatact
tccaaacatgaacccttgggggagatagctgaaatggaaattgacaaagaaaattttgaa
ggtgctgatcctattgtagaagatatttacaaggtgtcagctgatgttaacgtccagtca
aggcttatggataaaactgatgatgaagatgcgttgctacagatggaggcattatgcagg
tcaccaaataataagttggacgcccaacccatggaggtggatgcattgatagtggaggca
ggtatccagaaagaagttgatgccattgaagttgttgaccgtaatgtcgaaatcagagca
gatgtttggataggtgcgtctgaactcaccaacaatgtaaatgttacgctctcaactgga
gaatccaaaaaccttagtttttcagattatcaacctgtggaaggaattggaaatagtgag
caacatattgtgaatgaaactgaggtcctggaggcaaacttgcattgtgatgacaatgct
tccttgaatggtaaggaaagtcctggttgtcgggaggttgatccacagagtggcattgat
gcagaagtcactgcagttgcagaagatcgtggtgattgtgaagatgtaggttttggaaat
gatacagagtttctgaatgtagatgatgatgaaataactgaagctgtcgatgacatgccg
tgcgctgaagatactcgtcttcttgagaacagtggatggtcttcccgcaccagggctgtt
gccaagtatctccagactttacttgataaggaacctgcgcatgggaaaaaagttcttggc
atggacagtctgttaaatggtaaaactcgaaaggaagcatcaaggatgttttttgaaaca
ttggttcttaagacaagggattacatccatgtggaacaggcaaagccctttgacaacgtc
agcataagatctcgagtaaaactgatgaagtcagagttctaa
DBGET
integrated database retrieval system
