KEGG   Malus domestica (apple): 103434402
Entry
103434402         CDS       T03194                                 
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
  KO
K11267  sister chromatid cohesion protein PDS5
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103434402
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103434402
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    103434402
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Shu complex and associated proteins
     103434402
SSDB
Motif
Pfam: PDS5 PTM_DIR17_Tudor TPR_DNAAF5 BNIP2
Other DBs
NCBI-GeneID: 103434402
NCBI-ProteinID: XP_028959452
LinkDB
Position
05:join(46493487..46493579,46494912..46495115,46495219..46495400,46495923..46496049,46496148..46496366,46496471..46496687,46496776..46496921,46497015..46497160,46497774..46497923,46498044..46498092,46498182..46498373,46499319..46499501,46499847..46500001,46500081..46500207,46500311..46500460,46500552..46500611,46500825..46500961,46501079..46501196,46501350..46501484,46501575..46501774,46501948..46502104,46502221..46502367,46502774..46502854,46502959..46503396,46503474..46503620,46503720..46503827,46503955..46504034,46504235..46504286,46504391..46504477,46504604..46504641,46504785..46504847,46504942..46505090,46505283..46505707,46505842..46505892)
AA seq 1670 aa
MAQKLEQLLKEVGSKLETPHSSKDALVKLLKQAASCLSDLDQAPPASMLESMQPLLNAIV
KPELLKHQDRDVKLLVATCICEITRITAPEAPYSDEVLKDIFHLIVGTFSGLKDTSGPSF
GRRVLILETLAKYRSCVVMLDLECDDLVNEMFSTFFAVARDDHQETVLSSMQTIMVVLLE
ESEELRDDLLFIVLSILGRNRSDITVAARRLAMNVIEQCAGKLESGIKQFLISSMSGDNK
SENHQIDYHEVIYDVYRSAPQILSGVVPYLTGELLTDQLETRLKAVSLVGDLFSLPGSTI
FEAFQPIFSEFLKRLTDRVVEVRMLVLQHVKSCMLSNPFRAEAPEIISALCDRLLDFEET
VRKQVVAVVYDVACHALSSIPLETIKLVAERLRDKSLLVKKYTMERLAEIFRVYCTMCSD
GPLLSSDFDWIPGKILRCFYDKDFRSDTIESVLCESLFPTNFSVKDKVKHWVRVFSRFDK
VEVKALEKILEQKQRLQQEMQKYLALKQMHQDGDAPEVQKKILYCFRIMSRLFADPVKAE
ESFQFLDQLKDVNIWKILTNLVDPNTGSQQACTLRDDLLRILGEKHRLYDFLSTFSVKCS
YLLFNKEHVKEILLEVLVHKSTADMKYVQSCMNILVILARFSPLLLSGTGEELVNLLKDD
DETIKEGVLNILAKAGGTIREHLAVSSSSIDLVLERLCLEGSRRQAKYAVHALAAITKDD
GLKSLSVLYKRLVDMLEERTHLPAVLQSLGCIAQTAMPVFETREKEIEKFILENILKCDN
KSGDYKIASWDDKSDLCLLKIYGIKTLVKSYLPVKDAHVRSGIDGLLEILRNTLSCGEIS
KDIETSSVDKAHLRLASAKAILRLSKHWNHKIPVDIFYLTLKTSEISFPQAKKIFLNKVH
QYIKDRLLDGKYACAFFFNTSGSKSVEFQEEKQNLADIIQMYHQTKGRHLSMQQSDANSL
TAYPEYILPYLVHALAHHSCPNIDECKDVKAFEPIYRQLHLFLSMLVHRDDDVKSESSSN
IEKEDISAIISIFQSIKCSEDIYDATKSKNSHGICDLGLSVTKRLSPKEYDLQGLPASVP
LPSMLYKQYDKKEGDDSMASEGKTWLADDSAVAHFESLKLESSETGLSEIAEDELMKDGE
RDGGEVPLGRIIKRLRSQNSKAKKAKKNKASSADAENAENSVDILKMVRDINLDNLEKPS
KFESSNGHENLPSKKSRMDLKHKKENKRKSTEATSVPIPKRRRSSSAHGAFRSPRSTSKS
PLSASVDDVGNRKLVQGTESDLLVSCFRKNATSSSQRKGRASDHGLNDETNEVGEASDRE
EPNVLEADKDDLNSDFNSPAGSIKKRKRKSISGLAKCKFKESGKDVEDLIGCRIKVWWPM
DKRFYEGTVKSFDTLKRKHVILYEDGDVEVLRLEKERWELIDKGRKPTKKLNSSNKSPSK
EVSPGQKNKPTGGSRENKKPIKTVKRKRTPKKNSARKKGVSKRNHWGSRDKESSEVSNDE
PALTSKIDEIDSGSSEEEKAEKVDENVTDEGESDTEVKFVSEGKGLKDAEESPNNTEESD
EENPGSEGIPAEDMDSIPQDAENGTEEMQHSEEKEADELSGGSRGVNEEDPSDSEGTQDK
DDISGSPLKQEKSHVEPSSLSDAGDDELSDDEPLGKWTQRVVKKGSKRVR
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggcccaaaagctcgagcagctgctcaaggaggtgggatcgaagcttgagacccctcat
tcttccaaagacgctctcgtcaagctcttaaagcaagctgcatcatgtctttcggacttg
gatcaagcacctccagcgtctatgttggagtcaatgcagcctttgcttaatgcaattgtc
aagccagaactgttgaagcatcaagatagagacgtcaagcttctagttgcaacttgtatt
tgtgagataactcggattactgcacctgaagctccttatagtgatgaagtgctaaaggat
atatttcacttgattgtgggaacttttagtggattgaaagatacaagtggtccatcattt
ggtagaagagtactcattttggagactcttgccaaatataggtcatgtgttgtaatgttg
gacctcgaatgtgatgatctggtgaatgaaatgttcagtacattttttgcagttgccaga
gatgatcaccaagaaactgttttgtcatcgatgcaaacaatcatggttgtgctcttagaa
gagagcgaggaattgcgagatgatcttttgtttattgtattgtctatattaggtcgtaat
agaagtgatatcactgtggctgctaggaggcttgccatgaatgttatagaacagtgcgca
ggaaagcttgaatctggcattaaacaatttcttatatcatcaatgtcaggagacaacaag
tctgagaatcatcagattgattaccatgaagtcatctatgatgtatatcgttctgctccc
caaatcttatcaggagttgtcccatacctaacaggagagttactgactgatcagctagaa
actcgtttaaaagccgttagtttagttggagacctattctctctgccaggctctaccatc
tttgaagcctttcagccaatcttttcagagttcttgaagaggttgactgatagagttgtg
gaggttcgcatgttggtcctccaacatgtcaagagctgtatgctgtcaaatcctttcaga
gctgaagctcccgaaataatttctgccctctgtgaccggctattggactttgaagaaaca
gtacgaaagcaagttgttgctgtagtttatgatgtggcatgtcatgccctgagttccatt
ccgctagaaactataaaactggttgcagagcgccttcgagataaatctctacttgttaaa
aagtataccatggagaggttagctgagatattcagggtttattgcacaatgtgctctgat
ggtccactcctatccagtgattttgattggattcctgggaagattctgagatgtttttat
gacaaagatttcagatctgatacaattgaaagtgttctctgtgagtccctgttcccaact
aacttttcagtaaaagataaagttaaacattgggtgagagtcttctcaagatttgataaa
gttgaggttaaggctcttgagaagattctggagcagaagcagaggttacaacaagagatg
cagaagtatctggcacttaagcagatgcatcaggatggtgatgctcctgaggtccaaaaa
aaaattctctattgcttccgtataatgtcacggttgtttgctgatccagttaaggctgaa
gagagttttcaatttcttgatcaactgaaagacgttaacatctggaagatcttaacaaat
cttgttgatccaaacactggctcccagcaagcttgcaccttacgggatgatttgcttagg
attctaggtgaaaaacaccgactatatgattttcttagcactttctcagtgaagtgttct
tatctacttttcaacaaagagcatgtaaaggaaattcttctggaggttcttgtacacaaa
tctaccgcagatatgaaatatgtgcaatcttgcatgaatattttggtgattcttgcacgc
tttagtccattactactcagtgggacaggagaagaactagtaaatttgcttaaagacgat
gatgaaaccataaaagaaggggttttgaatattttagcaaaggctggtggtaccatccgg
gagcatcttgcagtgtcatcaagttccatagaccttgtattggagaggttgtgtttggag
ggcagtcgaagacaggcaaagtatgctgtacatgccctcgcagcgataacaaaggatgat
ggacttaaatcactctctgttctatacaagaggcttgtggatatgctggaggagaggaca
catttgcctgctgtactacaatctctggggtgtatagctcagactgcaatgccagttttt
gaaactagagagaaggaaattgaaaagtttatacttgaaaatatcctaaagtgcgataat
aaatcaggtgactataaaattgcatcctgggatgacaaaagtgatctttgtttgctaaag
atatatgggataaagacattagtgaaaagttatttgcctgtcaaagatgctcatgttcgc
tctggcattgatggtctgctggaaatcttaagaaacacactttcttgtggagaaatatca
aaagacatagaaacaagttcagttgacaaggcgcatttgaggcttgcttctgcaaaggcg
attcttcgtctgtccaagcactggaatcataagataccggttgatatcttctacttaacc
ttgaagacttcagagattagtttccctcaagctaagaaaattttcctgaacaaagttcat
caatacataaaggaccggcttttagatggaaaatacgcttgtgcattcttttttaacaca
tctggatcaaagtcagtggagtttcaagaggagaaacagaatctcgcagacattattcaa
atgtatcaccaaacaaaggggcggcatctctccatgcagcaatctgatgccaattcattg
actgcttatccggagtacatcctcccatacttggttcatgcccttgcacatcattcttgc
cctaatattgatgaatgcaaggatgtgaaagcatttgagccgatataccggcaattgcac
ttatttctgtctatgttggtgcatagagatgatgatgtcaagtcagaatctagtagcaac
attgaaaaggaggatatttctgctataatctctatctttcaaagtatcaagtgctctgaa
gatatatatgatgcaacaaagtcaaagaattcacatggtatttgtgaccttgggctgtca
gttaccaagcgcttatccccaaaggagtatgatttacaaggattgcctgcatcagttcct
ctaccttctatgttgtacaaacagtatgacaagaaagaaggagatgactctatggccagt
gaagggaaaacatggttggccgatgactctgcggtggctcactttgaatctcttaagtta
gagtctagtgagacgggactttcagagattgctgaagatgagcttatgaaagatggtgaa
agagatggaggtgaagtgcctttaggaagaattataaagcgcttaagatctcaaaattcc
aaggctaaaaaggcaaaaaagaacaaggcatcatcagctgatgcagagaatgctgaaaat
agtgttgatatattgaaaatggtcagggatataaatttggataatttggaaaagccttct
aagtttgagtcaagcaacggtcatgaaaatcttccaagcaagaaatcaagaatggatcta
aagcacaaaaaggaaaacaaaagaaaatctactgaggcaacgtctgtccccattcctaaa
cgtaggaggtcatcatccgctcatggtgctttcagatcacctagaagtacttcaaagtct
cctctaagtgcttcagtagacgatgtaggcaatagaaaactggttcaaggcaccgagtca
gatttgttggtttcatgcttccggaagaatgctacctcctcgtcacaacgtaaaggcaga
gcctctgaccatggtcttaatgatgagacaaatgaagttggagaagccagtgaccgtgaa
gagcctaatgtgctggaggctgacaaggatgacctaaatagtgatttcaactctcctgca
ggatccatcaagaagcggaaaagaaagagcatttccggtttggcaaagtgcaaattcaag
gaaagtggaaaagatgtcgaagacttgattggttgcagaataaaagtttggtggccaatg
gataagcgattttatgaaggcacggtgaagtcgtttgatacgttaaagaggaagcatgtg
atactgtatgaagatggagatgtagaagtacttcggttagaaaaggaacggtgggagctc
attgacaaaggtcgcaagcccacaaagaagttaaattcgtcaaataaatccccctcaaaa
gaagtgtcccctggtcaaaagaataagcccacaggtggttcgcgagagaacaaaaaacca
attaaaacagttaaaaggaaaagaacaccaaagaaaaactcggccaggaagaagggcgta
tcaaaaagaaatcattggggaagtagggacaaagagagttctgaagtatcgaatgatgag
cctgcccttacatctaaaattgatgaaatcgactctggtagttcagaagaagagaaagct
gaaaaagtggacgagaacgtgacagatgagggggaatctgacacggaagtgaagtttgtt
tctgaaggaaaagggttgaaagatgcggaagaaagtccaaataataccgaggaatctgat
gaagagaatcctggttcggaagggatccctgctgaagacatggacagtattccacaagat
gctgaaaatggaactgaggagatgcaacactcagaagagaaagaagcagatgaactaagt
ggagggtcaagaggggttaatgaggaagatccgtcagattctgaagggactcaagataaa
gatgatatttctggtagtcccttgaagcaggagaaatcccatgtagagccttcaagtctt
tctgatgccggagatgacgaactttctgatgatgagcctctcggcaagtggacgcaacga
gtagtgaaaaaaggttcaaagcgagtgcgatga

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