Malus domestica (apple): 103434514
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Entry
103434514 CDS
T03194
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103434514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103434514
03036 Chromosome and associated proteins [BR:
mdm03036
]
103434514
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103434514
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103434514
PBAF complex
103434514
GBAF(ncBAF) complex
103434514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103434514
NCBI-ProteinID:
XP_008371100
LinkDB
All DBs
Position
05:complement(join(45182021..45182863,45183109..45183711))
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AA seq
481 aa
AA seq
DB search
MATKSAAQDLSSSDTPSKPPPTPLPIPANPETPTTAAPRHPQPRPTSDADVIHVPSYSSW
FSPDHIHHCEVRFLPEFFDSRSPSKNPSLYKYYRNTIVAQSRAVNPSRKLTFTEARKSLV
GDVGSVRRVFDFLEAWGLINYTPSALNKPLKWEDKDSSKAAGASSNGGAESPAGGAKESP
KKRTCNGCKSVCSIACFVSEKNDMTLCARCYVRGNYQIGISSSDFRRVEINEEMGSGWAD
KDTLHLLEALMHYGDDWRKVAQHVGRSEKECVAHFLKIPFGEEFSGEFSDNAGDAECGLE
GDGDGTTPSLSKRMRLTPLADASNPIMAQAAFLSALAGVQVAEAAASAAVTALCEADYET
SKMSVTSLASNARQHETDAELNGDDKTDPDALGAAFVDANSQLEKEGLDVGRAISGITEV
QMREIRKKIIRFEALDLQMEKEWEQLEQMKSMLFVDQMTLLLSKSSAPKTAAAEEKNVKT
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaatcagcggcccaagacctctcctcctccgacaccccatccaaaccccca
cccactcctcttccgatccccgccaatcccgagactccgaccaccgccgctccccgccat
cctcaaccgcgtcccacctccgacgccgacgtcatccacgtccccagctattccagctgg
ttctcgccggaccacatccaccactgcgaggtccgattcctccccgagttcttcgattct
cggtccccttctaaaaaccctagcctctataagtattaccgcaacaccatcgtcgcccaa
tccagagccgtcaacccttctcggaagctcaccttcacggaggcccgcaagtctctcgtc
ggcgacgtcggctccgttcggagggttttcgatttcctcgaggcgtggggtttgatcaat
tacactccttccgcgctcaacaagcccctcaagtgggaggacaaggacagcagcaaggcc
gccggtgcttcctctaatggaggcgctgaatcccccgccggcggtgccaaggagagcccc
aagaagaggacctgcaatggctgcaagtctgtttgcagcattgcctgctttgtttccgaa
aagaatgacatgactctatgtgcaaggtgctatgttcgcggaaactatcagatcggcata
agttcttccgatttcaggcgggttgagatcaatgaagagatggggagtggctgggctgat
aaagatactctgcatcttctagaggcccttatgcattatggcgacgactggaggaaggtt
gcgcaacatgtcggtagaagcgagaaggaatgtgttgctcatttcctcaagattccattt
ggtgaggaattttctggcgaattttctgacaatgcaggtgatgctgaatgtggtttggag
ggtgatggtgatggtacaacaccgtctctaagtaaaagaatgcgtctcacgcctcttgcg
gatgcaagcaacccaattatggctcaggcggcctttctgtcagctctggcgggcgtgcag
gttgcagaggctgctgcttctgctgctgtaacagcgctatgtgaggcggattatgaaaca
agtaaaatgagcgttacatctctggcttcgaatgcaagacagcatgaaactgatgctgaa
ttaaacggagacgacaaaactgacccggatgcactgggggcagcttttgtagatgcgaat
tcacagcttgagaaggaagggctggatgtgggaagagcaatctccgggattacagaggta
cagatgagagagatccgaaagaagattatccgtttcgaggcgttagatttgcagatggag
aaagagtgggaacaactggagcaaatgaaaagcatgctctttgtcgatcagatgacactt
ttgttaagcaaaagttccgcaccaaaaaccgcggcggcggaggagaagaatgtaaaaacg
gattga
DBGET
integrated database retrieval system
