Malus domestica (apple): 103434587
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Entry
103434587 CDS
T03194
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103434587
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103434587
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103434587
NCBI-ProteinID:
XP_008371166
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Position
10:complement(join(42404772..42405123,42405282..42405385,42405622..42406326))
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AA seq
386 aa
AA seq
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MASLARLVLLLLCFLTCIAPTFQAYSPDYYTTAKIIPKNIMNVVDSCWCTKSDWATNRRA
LANCAVGFGKDALGGKYGATYVVTTSDDDPVNPAPGSLRYGVIQTQPLWIVFAKDMVITL
KNELIMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGLSIHDCKPGKGGNVRSTPTHV
GQRLGSDGDAISVFASSHVWIDHCFLARSTDGLLDVTHASTAVTITNNYFSQHDKVMLLG
HNDNFREDKNMRVTIAFNRFGAGLIERMPRVRFGYVANNIYEEWKMYAVGGSANPTIFSE
GNYFIAPETPFAKQVTKREAGGSWNNWKWRSSGDVFKNGAFFVQSGYGSCYPLYFPTQSF
KVSPGAMVPALTSNAGPLDCIVGKAC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctagcccgtctcgtattattgctcttatgtttcttaacttgtattgctcca
acatttcaagcctattccccagactactacaccaccgccaaaatcattcccaaaaacatc
atgaacgtggtagactcgtgttggtgcacaaagtccgattgggccaccaaccgccgcgcg
ttggccaactgcgcagtaggcttcggcaaagatgcgttgggaggaaaatatggggctact
tatgtagtcacgacctcagatgatgacccagtaaaccctgcacccggctcactccgttac
ggggtgatccaaacgcagccattatggatcgtttttgctaaggacatggtcatcacgctc
aaaaatgaactcattatgaatagtttcaagaccatagacggtagaggggctaaagttgaa
attgcgtacggaccatgcataacggtgcagggtgttagccacgttattatacatggatta
agcattcatgattgtaagcctgggaagggtgggaatgttaggagcactcctacacatgta
gggcaacgtttagggagcgacggagacgccatatctgtctttgcttcttcgcatgtttgg
attgaccattgcttcctagctcgtagcacagatggcctccttgatgtcacccatgcttcc
actgccgtcaccatcacaaacaactatttctctcagcatgacaaagtgatgctgcttggt
cacaatgacaattttagggaagataaaaatatgagagtcacaatagccttcaaccgtttt
ggggctggccttattgaaaggatgccaagggttaggtttgggtatgtggccaacaatata
tatgaggagtggaagatgtatgccgtaggaggcagcgccaatccaacaattttcagtgaa
gggaactacttcatagctcctgagactccttttgccaaacaggttacaaagagagaggct
ggaggcagttggaataattggaaatggagatcttcaggggatgtgttcaaaaatggtgct
ttttttgttcaatctggatatggaagctgctatccactttactttccaacgcaatcgttt
aaggtctctccaggagccatggttcctgctttaacctcaaatgcgggtcctctggactgc
attgttggcaaagcatgttaa
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