Malus domestica (apple): 103434956
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Entry
103434956 CDS
T03194
Name
(RefSeq) phytochrome E-like
KO
K12123
phytochrome E
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
103434956
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
103434956
NCBI-ProteinID:
XP_008371559
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All DBs
Position
05:join(41098382..41100428,41100591..41101398,41101531..41101824,41101949..41102192)
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AA seq
1130 aa
AA seq
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MELEKSSDRTRAAAFSSSSATSNMKPTPAAARPDKSIAHYREDANLLAEYEQSAVSGKSF
NYTRSVLFPPDSVPEEQVSAYLSRIQRGSLVQSFGCMLAIEEPTFRIIGFSENCHELLGL
DKLDSVFESNELMGLIGVDCRTLFTPPSAASLTKAAASREISLLNPIWVYSRSTQKPFYA
ILHRIDVGIVVDLEPARSGDPALSLAGAVQSQKLAVRAISRLQSLPGGDLGVLCDTVVED
VRKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLESYLGLHYPATDIPQAARFLFKQNRVRM
ICDCYANPVKVIQSEELKQPLCLVNSTLRSPHGCHRQYMANMGSIASLVMAVIINGNDST
KLWGLVVCHHTSPRHVPFPLRYACEFLMQAFGLQIYMELQLASQLAEKKILRTQTLLCDM
LLRDSPSGIVTQSPSIMNLVKCDGAALYYGGTCWLMGVTPTESQVKDIAEWLLNNHGDST
GLSTDSLAEAGYPGAPLLGNAVCGMATARVSSKDFLFWFRSHTAEEVKWGGAKHHPGDKD
DGERMHPRSSFKAFLEIVKTRSLPWEISEINAIHSLQLIMRDSFQDIEETGSRAVQQSDA
EMQLQGMDELSSVACEMVKLIETASVPIFGVDSDGLINGWNAKIAELTGLQDSEAMGKSL
VNEIVYEDSREAVENLLRRALQGEEDKNVELKLRNFGLSQHNSVVYIVASTCTSRSPAKN
VVGACFVGQDITCEKVVMEKFIRLQGDYKAIIQSLNPLIPPIFASDENACCSEWNSAMEK
LTGWTRDNVIGKTLPGEIFGGLCRLRGQDILTKFMIMLYQGISGKEIEKFPFGFFDRKGK
FVEALLTANKRTDAGGNIIGCFCFLQIFLPDLQSALEGHIQEDGECFSKLKELAYMRQEM
KNALSGIQFTHRLLESTTISEYQKQFLDTSNACERQIMTIIEDIDVKSIAEGSVKLNMEE
FMLGSVVDAIISQSMLLLREKNLQLFHEIPEEIKSLSLHGDQIRLQLVLSDFLLNVVNHT
PSSNGWVEIKISPGLKLIQDGNNYIRLQFRMTHPGQGLPTTLVQDMFEGGNRWTTQEGLG
LNLSRKILNRMNGQVQYVREHDKCYFLVNIELKHKKERQRVFVSHESTTT
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgaaaaaagcagtgacagaacacgcgccgccgcattctcctcctcctccgcc
acaagcaacatgaaacccacccccgctgctgccagacccgacaagtcaatcgctcactac
agggaggacgccaacctcttggccgagtacgagcagtctgccgtctccggtaagtccttc
aactacacaaggtcagtgctttttcctccggattctgtccccgaggagcaagtcagtgcc
tacttatcgagaatccaaaggggttctctcgtccaatcctttggctgcatgcttgcaatt
gaagaacctacttttcgaattatcggttttagtgagaattgccatgaattgctcggtttg
gataaattggatagtgttttcgagtcaaatgagttaatgggtttgattggggtggattgt
agaactctgtttactcctccttccgcggcttcattgacgaaagctgctgcttcgagggag
atttcgctgttaaacccgatttgggtgtattctaggagtacccagaagccattttatgct
attttgcatagaattgatgtgggaattgtggttgatttggagcctgctaggtctggtgat
cctgcattgtcacttgcaggggccgtacagtcacagaagctcgcggttcgcgcaatttct
aggcttcagtctctccctggaggggaccttggtgtgttgtgtgacacagttgtagaagat
gttcggaagcttactggatatgacagagttatggtttataagttccatgacgatgatcac
ggtgaggttgtgtctgaaattagaaggtcggatttggagtcttatttgggtttgcattac
cctgccacggatatccctcaagctgcccgtttcttgttcaagcagaatcgcgtgcgtatg
atctgcgattgctatgcgaatccagttaaagtcattcaaagtgaagaactgaagcaacct
ctgtgcttggtcaattcaactctccggtctccacacggctgccacagacagtacatggcg
aacatgggctcgattgcctcgttggtgatggcggttattatcaatggtaatgattcaacg
aagctttgggggttggtggtgtgccaccatacttccccccgccatgtcccttttcctctt
cgctacgcttgcgagtttcttatgcaggcatttgggctgcaaatctacatggagcttcaa
ttggcatcgcagttggctgagaaaaagattctcagaacacaaaccttgctttgtgacatg
ctcctccgtgattccccatccggtattgtgacccaatctccgagtataatgaatctcgtc
aagtgtgatggggctgcattgtactatggtgggacatgctggttgatgggtgtaactcca
actgaatcacaggttaaagatatagcagagtggctgctaaacaatcatggggattccacc
ggtctgagtaccgatagtttggcggaagctggttaccccggtgcacctttactgggcaat
gcagtttgtggtatggctaccgcaagggtcagttcaaaagatttcttgttttggttcagg
tcccacacggcagaggaagttaaatggggaggagctaagcatcatccaggggacaaggat
gacggtgaaaggatgcacccgagatcatcgtttaaagcttttcttgagatagtaaaaact
agaagtttgccttgggagatctctgagattaatgccatccactctttgcagctcatcatg
agagactcgtttcaggatatcgaggaaactggttcgagggcagtgcaacagagtgacgct
gagatgcagttgcaggggatggatgaactcagttccgtggcatgtgaaatggttaagttg
attgagacagcttctgttccaattttcggggttgattcggatggtctcatcaatggatgg
aacgcaaaaatagctgagttgacaggattacaagatagcgaagcgatggggaagtcccta
gttaatgagattgtttacgaggactcgcgtgaagctgttgaaaatcttttacgcagagcc
ttacaaggtgaggaggacaagaacgttgagttaaaactgagaaatttcgggctttcgcag
cataactcggttgtctatattgttgccagcacttgcacaagtaggagtcctgcaaagaat
gttgtcggtgcatgctttgtggggcaggatattacttgtgaaaaggttgttatggaaaaa
ttcatccgcctgcaaggggattacaaggcaatcatacaaagtcttaacccgttgattcca
ccgatatttgcatctgacgagaatgcctgctgctccgaatggaattcagccatggaaaag
cttactggttggacaagagataacgttattggtaaaacgcttcctggggaaatctttgga
ggtctttgtcgactgagaggtcaagatatactgactaaattcatgattatgttgtaccaa
ggaatcagtggtaaagagattgagaagtttccgttcgggttttttgatagaaaggggaag
ttcgttgaggcgctcttaacagctaacaagaggactgatgcaggtgggaatataattggt
tgcttctgtttcctgcaaatttttttgcctgacttgcagtcggccttggaaggacacata
caagaggatggagaatgcttttcgaaacttaaggaattagcatacatgcgacaagagatg
aaaaacgcgttaagtggtattcagttcacccacagactccttgaaagtacgactatttca
gaatatcagaagcaattcctcgacactagcaatgcgtgcgaaagacaaatcatgacaatc
atcgaggatatagatgtgaagagcatagccgaaggtagcgtgaagctgaacatggaagaa
tttatgttgggaagcgtagtggacgccattattagccaatcaatgctcttgctgagggaa
aagaatctgcagctctttcatgagattccagaagaaattaagtcactgtctttacatggc
gatcaaatccggcttcagttggttctgtcagatttcttgctcaatgtggtgaatcacaca
ccttcctcgaatggctgggtcgaaattaaaatttcacctggtttaaagttgatacaggac
ggcaacaattacatccgcctccagttcagaatgacacaccccggccaaggccttccaacg
acgcttgtacaggatatgttcgagggaggaaacagatggacgacacaggaaggtctcgga
ctaaatctgtcacgaaaaattctgaacagaatgaatggtcaggtgcagtatgttagagag
cacgataaatgctacttcctcgttaacattgaacttaaacacaagaaagaaaggcagagg
gtatttgtgtctcatgagagcacaacgacttga
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