KEGG   Malus domestica (apple): 103435151
Entry
103435151         CDS       T03194                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103435151
  09124 Replication and repair
   03420 Nucleotide excision repair
    103435151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103435151
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103435151
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103435151
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103435151
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103435151
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103435151
Exosome [BR:mdm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103435151
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 103435151
NCBI-ProteinID: XP_070678875
LinkDB
Position
05:complement(join(40442256..40442369,40442509..40442589,40442697..40442777,40442984..40443064,40443183..40443320,40443790..40443921,40444012..40444072,40444546..40444652,40445739..40445792,40445881..40445982,40446148..40446273,40446630..40446917,40447013..40447135,40447325..40447505,40448153..40448499,40448584..40448699,40449999..40450371))
AA seq 834 aa
MSLMSHPTKRSSAINHSSSGTSSSSSSSLNPSSAAPPMKKAKSQAVACSLDPSKNGLHHH
HHHPHTHPTQDPDNDTVFDPSSMSLDDDLRPDDPSPRGVAANLSRKKAQPPQPSTKKLVI
KLVKAKPTLPTNFEEETWAKLKSAICAIFLKKPDSCDLEKLYQAVTDLCLHKMGGSLYQR
IEKECERHIAAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTP
NVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIEKERLGEAVARTLLNHLLKMFTALG
IYSESFEKPFLECTSEFYAAEGMKYMQQADVPDYLKHVETRLHEEHERCLIYLDASTRKP
LVATAEKQLLERHIPAILDKGFTLLMDGNRIEDLQRMHTLFSRVNALESLRQALSSYIRR
TGQGIIMDEEKDKEMVASLLEFKASLDTIWEESFFKNEVFCNTIKDAFEHLINLRQNRPA
ELIAKFLDEKLRAGNKGTSEEELEGMLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS
ASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSV
HVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG
KKELAVSLFQTVVLMLFNDAEKLSLEDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKG
RDVDDGDTFTFNDSFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK
TRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgagtttgatgtctcaccccaccaaacgctcctcagccatcaaccacagcagcagcggc
acctcctcctcctcttcctcctctctcaacccttcttccgccgccccgcccatgaaaaag
gccaagtcgcaggcggtggcctgttccctcgatcccagcaaaaatggcctccaccaccac
caccaccaccctcacactcaccctacccaggaccccgataacgacaccgtattcgacccc
tcttccatgtccctcgacgatgatctcaggcccgacgacccctctccccgaggcgtcgcc
gccaatttgtcccgcaaaaaggcccagccccctcagccctctaccaagaagctcgtcatc
aagctcgtcaaagctaaacccacgttacccacgaattttgaagaggaaacatgggcaaag
ctgaagtcggctatttgtgctatattcttgaagaaacctgattcttgtgacttggagaag
ctttatcaggctgttactgatctctgtttgcacaagatgggaggaagtctttatcaacga
attgagaaggagtgcgaaagacacatagctgcagcgctgcaatctttggttggccaaagc
ccagatttagtggtctttctatcacttgttgagagatgctggcaggacctttgtgatcag
atgttaatgattcgcggtatagccttatatcttgataggacatatgtgaaacaaacacca
aatgtgcgttcattgtgggacatgggattgcagcttttccgcaaacatctttctctgtct
ccagaagttgaacacaaaactgtcactggccttttaagaatgatagagaaagaaagatta
ggtgaagcagtggccaggactctgcttaaccatcttttgaagatgtttacagctttaggg
atctactcagaaagctttgagaagccatttcttgaatgtacttctgaattctatgctgct
gaaggcatgaaatatatgcagcaagcggatgttccggattacttgaagcatgtggagaca
aggttgcatgaagaacatgaaagatgtttaatctacctggatgcaagtacaagaaagcca
ttagttgcaacagcagaaaaacagcttttagagcgccatattcctgccattctcgacaag
ggtttcacattgctgatggatggcaatcgcattgaggaccttcaaaggatgcacactctt
ttctccagagtcaatgccctggaatcactaaggcaagcgcttagctcatacatccggagg
acagggcaggggattatcatggatgaagaaaaagataaagaaatggttgcttctcttttg
gaatttaaggcttctcttgacactatatgggaagaaagctttttcaagaatgaagtattt
tgcaacaccataaaggatgccttcgagcatttaattaatctccgacagaaccgacctgct
gagctgattgcaaagtttttggacgagaagcttcgtgctgggaataagggtacttctgaa
gaggaattggagggaatgcttgataaggtcttggttttattcaggtttatacagggtaag
gacgtgtttgaagcattttataagaaagatcttgcaaaaaggctactgttgggaaagagt
gcttctattgacgcagagaagtctatgatttccaagctgaagaccgagtgtggcagtcag
tttacgaacaaacttgaaggaatgttcaaggatattgaactgtcgaaggagataaacgag
tccttcaaacaatcatcccaggccaggacaaaactcccatcagggattgagatgagtgtt
catgtccttacgactgggtactggcctacatatcctcccatggatgttagacttcctcat
gaattgaatgtttaccaggatatcttcaaggagttttacctaagcaagtacagtggtagg
cgtttgatgtggcaaaattcattaggccactgtgtcttgaaagcagagtttcctaaaggc
aaaaaggagcttgcagtttctctgtttcagaccgttgtcttgatgctgtttaatgatgct
gagaagctaagccttgaagacattaaggattcaactggcattgaggacaaggaactgaga
agaactctgcagtcccttgcatgtggaaaagttcgtgtcctacaaaagtttcccaagggg
agagacgtggacgatggcgatacatttacgttcaatgattcatttactgctcctctctac
cgcataaaggtgaatgcgatccaaatgaaggaaacagtggaggagaacacgagcaccact
gaaagagtatttcaagaccgccaatatcaggttgatgctgcaattgtacggataatgaaa
actaggaaggtgctgagtcacactcttctgataacagaactgttccaacagcttaaattt
ccgataaagccggcagatttgaagaaaaggattgaaagcctgattgaccgggagtaccta
gaacgggacaagaacaacccgcaaatttacaactacctagcataa

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