KEGG   Malus domestica (apple): 103435731
Entry
103435731         CDS       T03194                                 
Name
(RefSeq) protein CHROMATIN REMODELING 8
  KO
K10841  DNA excision repair protein ERCC-6
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103435731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103435731
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103435731
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    103435731
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      103435731
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII SWI2_SNF2
Other DBs
NCBI-GeneID: 103435731
NCBI-ProteinID: XP_008372358
LinkDB
Position
05:join(31474030..31474122,31474292..31474825,31474953..31475358,31475481..31476336,31476596..31477205,31477440..31477907,31478091..31478747)
AA seq 1207 aa
MEEDEDAILLNSLKGATAANPEDIERDILSGVHNNGNGSNVSEVGGSNEEEERLEKSESI
DPSVASGVKLYSKLRAVEFEIDAVESTVEPEQTRSEEGDRDGGDGAEAGNKADNLQHALA
TDRLRSLKKTKAQLEKELSDLGKGRPSKGIARDKVLLDIVKDKPAPKRKSKQVQISGKKL
EKRIKTVSFDEDDDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERGLQEQGPSR
GRNIPAEGGRSDDFVSASVARAVQSLSDAAQARPATKLLDPEALPKLDPPTHPFKRLRKP
LKIPQSLENGTQRNKSSGKKRKRPLPDKRWRKRISLEENNLHESENTPSCEEENQDDVGD
VDDDEYPHVTLEGGLKIPEYIFKQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQV
LSFLGALHFSHMYKPSIIVCPVTLLRQWKREAKKWYPSFHVELLHDSAREPAIKKKGSKS
DESDSDSEGSSDSDYERPESSKSTKKWDSLINRVLRSESGLLITTYEQLRIVGESLLDVD
WGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGV
LPIFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVDAQLTKKTE
HVIFCSLTDEQRSAYRAFLASSEVEQIMDGNRNSLYGIDVMRKICNHPDLLEREHCGQNP
DYGNLERSGKLKVVSQVLKVWKDQGHRVLLFTQTQQMLDIIESYLVSDGYSYRRMDGLTP
IKQRMALIDEFNNSSDVFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWR
IGQKRDVTIYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTLSDD
RENGSTETAHLFGQLSEDANVIGVQNEPDTQYSQRGSVQSTNGVVADNANNSEAGPSRRN
GKEKADQSDGEVDEETNILRCLFDAQGIHSAMNHDVIMNAHDEEKMKLDEQASRVAQRAA
EALRQSRMLRSRDGVSVPTWTGKSGMAGAPSAVRGKFGSTLNSQLVKNTKRSDEGPSNGT
NGFVAGAPAGKALSSAELLAKIRGNQERAVEAGIEHQFNRAKSFDVGPSRTGHNLGGVQP
EVVIRQICTFIQQRGGSTDSSSIVQHFKDRIPSRDLPLFKNLLKEIAKLEKNQNGAVWVL
KPEFDRQ
NT seq 3624 nt   +upstreamnt  +downstreamnt
atggaggaagacgaagatgcaattttgctcaacagtttgaaaggggcgacggcggcgaat
cccgaggatatcgagagggacattctatcaggggtacataacaatggcaatggtagtaat
gttagtgaagttggagggagtaatgaggaggaggaacgccttgagaaatccgaaagtatt
gatccatcggttgccagtggggtcaaattgtatagcaaattgagggcagtcgagtttgaa
attgatgccgttgagtccactgttgaaccagaacaaacgcggagtgaagagggtgatcgt
gatggtggtgatggtgcagaggcgggaaataaggcagataacctccagcatgccctggct
actgaccggttaagaagtctaaagaaaacaaaggcgcaacttgagaaggagctttcggat
ttaggcaagggaagaccgtccaagggtattgcgcgtgacaaagtcttattggatattgtc
aaggacaagcctgcacccaagaggaagtcgaaacaagttcagatatccggaaaaaagcta
gagaaaaggatcaaaacggtctcatttgatgaggatgatgactttgatgctgtgttggat
gcagcatctgcaggctttgttgaaacggaaagggatgaattagttaggaaaggaatttta
actcctttccataagctaaagggctttgaacgcggccttcaagaacaagggccatctcgg
gggcgtaatattcctgcagaaggaggcaggagtgatgattttgtttcagccagtgttgct
agagcagtgcagtcactttcagatgctgctcaagctcgcccagctaccaagttgcttgat
ccagaagctctaccaaagcttgatccacccactcatccttttaagaggctaaggaaaccg
cttaaaattcctcaatccctagaaaatggtacacagaggaataaaagttcaggaaagaaa
aggaagcgtcctttgcctgacaaaagatggagaaagcgcatttctcttgaggaaaataat
ttgcatgaaagtgaaaacactcccagctgtgaagaagaaaaccaagatgatgttggagat
gtagatgatgatgagtatccgcatgtgaccctagaaggggggctgaaaattccggagtac
atttttaaacaactctttgactatcaaaaggtaggggtccagtggctatgggaactgcat
tgccaaagggcgggcggaattattggagatgagatgggtcttggtaaaaccatccaggtt
ctgtctttcctcggtgcattgcatttcagtcatatgtataaaccaagcattattgtctgc
ccagttactcttttgcgccaatggaaaagggaggctaaaaaatggtacccgagctttcat
gtggagttacttcatgattcagctcgggagcctgctattaaaaaaaaaggatcaaagtct
gatgaaagtgattctgatagtgaaggttcatcggacagtgattatgagagaccagaatca
tctaaaagcaccaaaaaatgggattccttgatcaaccgtgttttgaggtcggaatctggg
ttgctaattacaacttatgagcaactccgtattgtaggggaaagtttgctcgacgttgat
tggggttatgcagttctggatgaaggacaccgaatcaggaacccaaatgcagaagttact
ctagtttgtaagcagttacaaacagtacatcgtattataatgacaggtgcaccaattcag
aacaagctgactgaactgtggtccttgtttgattttgttttccctggaaagttgggggtg
ttgcccatatttgaggctgagtttgcagttcccatatctgttggtggctatgcgaatgct
tcaccattacaagtatccactgcatacaggtgtgctgtggttttgcgagacttgatcatg
ccgtatctcctccggcgcatgaaggctgatgtggatgcgcagctgactaagaagactgaa
catgtcatcttttgcagcctcactgatgagcaaagatctgcatatagagcatttcttgct
agttctgaggtggaacagattatggatggtaataggaattcgctttatggaattgatgtc
atgcgcaagatctgcaaccaccctgatctgcttgagagggaacactgcggccagaatcca
gattatgggaatctagaacgcagtgggaaattaaaagttgtttcacaagtgcttaaagtt
tggaaggatcaagggcatcgtgttcttctttttacacaaactcagcaaatgcttgacatt
attgaaagttatctggtttctgatggttatagttaccggaggatggatggtcttactccc
atcaaacagaggatggccttaatagatgaatttaacaactcaagtgatgtgtttgttttc
attttaacaactaaagtgggtggtttaggaacaaatctgacaggtgcaaacagggtgatc
atctttgatcccgactggaacccttcaactgacatgcaggcaagagagcgggcttggcgt
attggtcaaaagcgggatgtaaccatatatagattgataacccgtggaaccatagaggag
aaggtatatcatagacaaatttacaagcatttcctgaccaataagatattgaagaaccca
caacagagaaggttctttaaagctagagacatgaaggatcttttcactctgagtgatgac
agagagaatgggtctaccgaaacagctcatctgttcggtcaattatctgaagatgccaac
gtcattggtgtgcagaatgaacccgatacgcaatattctcagagaggttctgtacagtct
accaatggtgttgtggctgacaatgcaaataactcagaggctggaccatccaggaggaat
gggaaagaaaaggctgaccagagtgacggtgaagtagatgaagagacaaatattttgagg
tgcctttttgacgcccaagggatacatagtgctatgaaccatgatgtaatcatgaatgcc
catgatgaagagaagatgaagcttgacgagcaagcttcccgagttgcacaaagagcagca
gaagcgttgcgccagtcacggatgcttcgaagccgtgatggcgtgtctgtccccacatgg
actgggaaatcaggaatggcaggtgcaccatcagctgtccgtgggaaattcgggtctact
ctgaactcccagttggtcaagaataccaaacggtcagatgaaggccccagcaacggcaca
aacggtttcgtggctggggctcctgctgggaaggcattatcttctgctgaattactggca
aaaattagaggaaaccaagaaagagctgtggaagcaggaattgagcatcagtttaaccga
gcaaaatcctttgatgttggaccttctaggaccggccacaacttaggcggagtgcaaccc
gaagtagtgattcgtcagatctgtacattcatccaacaaagaggcggaagtacggattct
tcaagcatagtgcagcattttaaggacagaataccatcaagggatcttcccttgtttaag
aatcttttgaaggaaatagccaaactggagaaaaaccaaaacggagcagtttgggttcta
aagccagagtttgatcgtcagtaa

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