Malus domestica (apple): 103435802
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Entry
103435802 CDS
T03194
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103435802
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103435802
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103435802
NCBI-ProteinID:
XP_008372438
UniProt:
A0A498JY68
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Position
05:join(30060293..30060426,30060526..30060579,30061141..30061206,30063410..30064052,30064167..30064270,30064415..30064553,30064777..30064992)
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AA seq
451 aa
AA seq
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MRAYSKATMAVSLNLFSLLSTMAVLLALLASTNASAESGKNVNSRFVGPKESISSKNSSI
AERFEEALNEHAVDNPDEIASMVDMSIRNSTERRNLGFFSCATGNPIDDCWRCDPHWQLH
RKRLANCGIGFGRNAVGGRDGKYYVVNNPGNDDPVNPRAGTLRHAVIQDRPLWIVFKRDM
VITLKQELIMNSFKTIDARGVNVHIAYGACITIQYVTNVIIHGLHIHDCKPTGNAMVRSS
PNHYGWRTMADGDAISIFGSSHIWIDHNSFSKCADGLVDAIMGSTALTISNNYFTHHNEV
MLLGHSDSYVRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE
PTINSQGNRYLAPNNGFAKEVTHRVNPNDWKHWNWRSEGDLLLNGAYFIASGTGSGASYA
RASSLGAKSSSMVGSITASAGVLNCRRGFQC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttactctaaagcaacaatggcggtctctttgaacttgttttcgttactttcg
acaatggcggttcttctagctctgcttgcaagcacaaatgcctctgcagagagtggcaag
aatgttaattcaaggtttgtgggaccaaaggagtcaatcagctccaagaactcatcaata
gcagaaaggtttgaagaagctttgaatgagcacgcagtagataatccagatgaaattgcc
tctatggttgacatgagcattcgtaatagcacagagagaagaaatttgggattcttttcg
tgtgcgacggggaatccaattgatgattgttggaggtgtgacccacattggcagctccac
cgcaagcgcttagccaactgcggcatagggttcgggcgcaacgccgtgggcggacgcgac
gggaaatactacgtggtgaacaaccccggcaacgacgatcccgtcaaccctagagccgga
acactccgccacgctgtcattcaggataggccgttgtggattgtgttcaagcgtgacatg
gtgatcacactaaagcaagagctaattatgaacagcttcaagacaattgatgcacgtgga
gtcaatgtgcacatagcatatggggcatgcattacgattcaatatgttactaacgtcatc
atccatgggctgcatatccatgactgcaaacccaccggaaatgccatggtccggagctcg
ccgaaccattacgggtggagaacgatggcggacggggacgcgatttccatttttggatcc
agccacatttggatcgaccataattctttttccaaatgtgctgatgggcttgttgatgct
atcatgggctctactgcacttaccatttccaacaactacttcacccaccataatgaggtt
atgctactgggccacagtgactcctatgtaagggacaagcttatgcaagtgacaattgcc
tacaatcattttggtgagggacttattcagaggatgccaaggtgtaggcacgggtatttc
catgtggtgaacaatgactacacacattgggagatgtatgccattggtggaagtgctgaa
cccacaattaacagccagggcaacagatatctggcccctaacaatggttttgctaaggag
gtgacacatagagttaacccaaatgactggaagcactggaactggagatcagaaggagac
ctgctcctaaatggagcctatttcattgcatcaggaactggttccggagcaagctatgcc
agggcctctagcttgggggccaagtcatcttccatggttggctccatcacagccagcgcc
ggcgtcctcaactgccggaggggtttccaatgttaa
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