Malus domestica (apple): 103436110
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Entry
103436110 CDS
T03194
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103436110
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103436110
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103436110
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C85
103436110
Ubiquitin system [BR:
mdm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
103436110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
Motif
Other DBs
NCBI-GeneID:
103436110
NCBI-ProteinID:
XP_017187968
LinkDB
All DBs
Position
11:join(17528888..17529574,17530045..17530206,17530677..17530754,17532772..17532850,17532938..17533083,17533792..17533857,17533951..17534122,17534340..17534554)
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AA seq
534 aa
AA seq
DB search
MTRILVQRGSSSGSSSNPTRPSSLSGSSSAWAQPQVNNPQVLSVVKDEEIVEEAQENVIL
DELPEYCESDDNKAVKSDDLLTESFNDDNVGPSEERADGEKVGKNDIASPGELMKGLDGL
RISERVTVENVDSSRDSLQNVIGSSQPPPPPVPPPKLPSANSNSRRSVSGSSNAVRIGPS
RRAVAWPVVSTRTSPNGSRPSSPRSHGESEGYNSADEHSPCFVSSYDDTERERQFEIDIR
RAKGFEVKKMLEDGNCLFRAVADQVYGDSEAYDLIRQMCMDYMERERDHFSQFITEGFTS
YCKRKRRDKVYGNNVEIQALSEMYNRPIHIYSYSTEPINIFHGSYDTDTPPLRLSYHHGN
HYNSLVDPRRQTIGVGLGFSRLRGSNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLEL
TEKEIERMVMEASRLEYADGTFKQQLGRRESSTSSAEPSSSGARSSGSETKMVGRDKGFQ
DSTPSSSMQVVLSMGFSYLQVIEAYNIFGDDVDSMVCYLLETSSSSRRKGKATE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaattctggttcagcgaggttcctcgagtggttcttcttccaacccaactcgt
ccttcttccttgtctgggtcttcttctgcttgggcacagccacaggttaataatcctcag
gttctttcggttgtgaaagatgaggaaattgtagaggaggcacaagaaaatgttattttg
gatgagctgccagagtattgtgagagtgatgacaataaggctgtgaaaagtgatgatctt
ttgacagaaagctttaatgatgacaatgtgggtccaagtgaggaacgagctgatggggag
aaagttggtaaaaatgacattgcaagcccaggggaattgatgaaaggtctagacgggctg
aggatttctgaaagggtgacagttgaaaatgtggactcgagcagggattctttacaaaat
gtgattgggagttctcaaccaccacctcctccagtccctcccccaaaacttccctcggca
aactcaaattcaaggagatctgtctcaggaagttcaaatgctgtgcggattgggccttct
agaagagcagttgcctggcctgttgtttcaactaggacttcgccgaatgggtcgcggcct
tcttctcccaggtctcatggtgaaagcgaggggtacaatagcgctgatgagcatagtcct
tgctttgtgtcttcctatgatgacactgaaagagaacgacagtttgaaattgatattaga
cgtgcaaaaggttttgaagtgaaaaaaatgctggaggatgggaattgtctctttcgtgct
gttgcagatcaagtttatggggattctgaagcctatgacttgattaggcaaatgtgcatg
gattacatggaacgagagagggatcacttttcacaatttattacagaaggatttacctct
tattgtaagaggaaaagaagagacaaggtatacggaaacaatgtggagatccaagcctta
tctgaaatgtataatcggcccatccatatttattcctatagcacagaaccgattaatatc
ttccacggaagctatgacactgacacaccacccctacgattaagttatcatcatggaaat
cattacaactctcttgttgatccccgtcgtcagaccatcggtgtaggacttgggttcagc
cgtcttcgtgggtcaaatgttgacaaggatcaggtcaaggctgctattaaggctcaacaa
gaccaacaaattgataatgcacttctagctgaggggcgattttactcagatctggagctt
actgagaaagaaattgagcgcatggtgatggaagcttcaaggcttgaatatgcagatggc
acatttaagcaacaacttggtcgtagagaatcttccacttctagtgctgagccgtcatct
tctggagctagatcatcgggcagtgagactaaaatggtaggtagggacaaaggatttcag
gactcaaccccaagcagtagtatgcaagtcgtgctatcgatggggttcagctacctgcag
gtgatcgaggcatacaacatattcggagatgatgtcgattccatggtttgttacttgttg
gaaactagcagcagtagccggcgcaaaggcaaggcaaccgaatga
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