Malus domestica (apple): 103436111
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Entry
103436111 CDS
T03194
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103436111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103436111
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103436111
mRNA degradation factors
5'-3' decay
Decapping complex
103436111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
103436111
NCBI-ProteinID:
XP_008372751
LinkDB
All DBs
Position
11:join(17542983..17543141,17543261..17543301,17543386..17543435,17544173..17544317,17545177..17545233,17545581..17545707,17546266..17546736,17547124..17547180)
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AA seq
368 aa
AA seq
DB search
MSQNGKLTPNLDQQSTKLLNLTVLQRIDPFVEEILITSTHVTFYEFNTDLSEWSRKDVEG
SLFVVKRNAQPRFQFIVMNRRNTENLVEDLLGDFEFEVQHPYLLYRNAAREVNGIWFYNP
SECEEVANLFSRILSAYSKVPQKSMASPTKSEFEELEAVPSMVVMDGPLEPSSSTASHVT
DVPDDPAFVNFFSTAMTIVTSSTTAITGQPYQSSSTVSLPSHPVGVAPSSIPGMQIPSAP
LLLSTTLSSYLDLPESHNITNLASNLVKPSSFFGHPSSSVTTMPPVSASIPAAPLLHPAV
TVQRPYGAPLLQPFPPPAPPPSLTPASFPTPNYGPVNRDKVRNALMLFVQDNQFIDMVYG
ALQKAPHS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaacgggaaattgacgccgaatctggaccagcagagcacgaagcttctgaat
ctgacggttctgcagcgaatcgaccccttcgtcgaggaaattctcatcacctccactcac
gtcaccttctacgagttcaacactgacctcagcgaatggagtcgcaaggacgttgaagga
tcgctcttcgtggtcaagaggaatgcgcaacctcggtttcagttcattgtgatgaaccgg
cggaatactgaaaatttggtggaggatctcttgggagattttgaatttgaagtccaacat
ccatatctattgtatcgaaatgcggctcgagaggtcaatggcatttggttttacaatcca
agtgaatgtgaggaggtggcaaatctttttagcaggattcttagtgcatattccaaggtg
cctcaaaagtcaatggcatcaccaacaaagagtgagtttgaggaactggaagcagttcca
agcatggttgttatggatggtcctttggagccatcatcatcaactgcctctcatgtcact
gacgttccagatgatccagcttttgtgaacttcttcagtacggctatgactatcgtgact
tcttcaactacagcaattaccggacagccttaccagtcatcttcgacagtctctctacct
tctcatccagtcggtgttgccccttcaagtattcctggcatgcaaataccgtctgctcca
ctgttactgtctacaactttgtcctcttaccttgacctccctgaatcccataacatcacc
aacttggccagtaatcttgtaaagccatcttctttttttggtcatccttcctcttcagta
acaaccatgccacctgtctctgcatcaatccctgctgctcctcttcttcaccctgctgta
actgtgcaacgtccatatggtgctcctcttttacaaccttttccaccgccagctcctcca
ccatctctcactcctgcttctttccctactccgaactatgggccagttaacagagataaa
gtacgaaatgctctcatgctgtttgtacaggataatcaattcattgacatggtatacgga
gcactccagaaagcaccccactcataa
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integrated database retrieval system
