Malus domestica (apple): 103436382
Help
Entry
103436382 CDS
T03194
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103436382
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103436382
microRNA pathway
RISC loading complex
103436382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
Motif
Other DBs
NCBI-GeneID:
103436382
NCBI-ProteinID:
XP_008373030
LinkDB
All DBs
Position
12:join(10547604..10547673,10547840..10548117,10548215..10548663,10548839..10548942,10549284..10549480,10549592..10549801,10549960..10550358,10550628..10550906,10551195..10551539)
Genome browser
AA seq
776 aa
AA seq
DB search
MDKDEIRNKSADPLGVEEAKQELGREPSDDEQPRYVPIELVKPPCSNDASVMYHCYLIEL
KPNFDCDIPVSDIVLGMRNELDCDTIANMNFELQVQRGPLTVNFKHAGDVSLSSEQVLAC
RRFQITIFKILVDHKLKKLEEVLERFCLGQNHWTESIDYLLLPAERRIHQRSSIIDLESI
MSMSSLCNNDSKNSACVNFPQPNNNSHVLLHTQNGMVCTCRIQNSVVYTPHNSILYCITG
LLDDLNGNSLMKDNKSLTYKAHYEAKHGINLCFDQQLLLNGRHIFRVQNYLLKCRQQTKK
ESSDKSVELPPELCAIIMSPISTSNLHSFSLVPSILHRLESLLLAVNLKHMILDHCPQNI
TIPTIKVLESITTKGCQENYDLESLETLGDSFLKYAASQQLFKTYQNDREGLLSVNKEQI
ISNLSLGKLGCDRKISGFIREESFDPKKWIIPGDYSGNYFLNEELLFNKRSIYVGGTRKI
DTKVVGDVVEALIGAFLSTGGELDAIYFMNWVGIEVDLDHIRYERHLPVQPEKLIDVGHL
ESLLGYKFCDPSLLVEALSHGSYMPGGYQRLEFLGDAVLDYMITTYFYYKYPGMMSPGFL
TDMRSASVNNDCYARSAVKAGLHEHILASDIVHRNIDSTVNNFGLLSTESTFGFESETSF
TSVLADIVEALAGAIFIDSGYDKQIVFQSIRRLLEPLVSPETLRLHPGRDFNDYCQKKHY
NVQKLVECFQNGEAMVTIEVEAEGVTYKHTSTASNKITARKLAQKQVLRSLKENGL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggataaagacgaaatccggaataaatctgctgatcctcttggggtggaagaagccaaa
caagaacttgggcgtgaaccttctgatgatgaacaaccccgttatgtcccaatcgagctg
gtcaaacctccgtgttcaaatgatgctagtgtaatgtatcattgctacttaattgagctg
aaaccgaattttgattgcgatattccagttagcgatatcgtacttggcatgagaaatgaa
cttgattgtgatactattgcaaatatgaattttgaattacaagttcaaaggggtccttta
acagtaaactttaaacatgctggagatgttagtctaagttcagagcaggttcttgcgtgc
agaaggttccaaatcacaatttttaagattctagtggatcacaaattgaaaaagttggaa
gaagttttagaaagattttgtttgggacaaaaccattggactgaatcaattgattacctt
ttgctaccggcagaaaggaggatacaccagagatcatcaatcattgatttggaaagcatt
atgtctatgtcgtctctctgtaacaatgattctaagaatagtgcttgtgtaaattttcct
caaccgaacaacaattcccatgttctgctacatacccaaaatggcatggtttgtacttgc
aggatccagaattctgtggtctatacgcctcataacagtatcctgtattgcatcactggt
ctgttggatgacttgaatggaaactcactgatgaaggacaacaaatctcttacctacaaa
gcccactatgaagcaaagcatgggatcaacttgtgtttcgatcaacagttattgttgaat
gggagacacatttttcgggtacaaaattatcttctgaagtgccgacaacagaccaaaaaa
gaatcaagtgataaatctgttgaattgccacctgaactttgcgctataatcatgtcacct
atatcaaccagcaatttacattcattctcacttgttccgtccatcttgcatcggcttgag
tctttactactcgctgtcaacttgaaacacatgattttggatcattgcccgcaaaatatt
actatcccaaccatcaaggtcctggaatctattaccacaaaaggttgccaagagaactac
gatttggaatccttggaaactcttggagattcctttcttaagtatgctgcaagtcagcag
ctttttaaaacctatcaaaatgatcgtgagggcctccttagcgtaaataaggaacaaata
atttctaatctttcccttggcaagcttggatgtgaccgtaaaatttcgggttttattcgt
gaggagagttttgatccgaaaaagtggattatacctggagattattctggaaattatttc
ttaaatgaggagttgctttttaataaaagaagcatttacgttgggggaacaaggaagatc
gatactaaagttgttggagatgtagttgaggcactaatcggtgcatttcttagcacaggt
ggtgaactagatgccatatatttcatgaactgggttggtatagaggtggatttagaccac
atacgatatgagaggcacttaccagtgcagccggagaagctcattgatgtcggacattta
gagtcattgcttggctacaaattttgtgatccttctcttctcgtggaagcactaagccat
ggttcttacatgccaggaggttaccagcggctagaatttcttggtgatgcggtgttggat
tatatgatcactacttatttttactataagtatcctgggatgatgtcgccgggattttta
actgatatgaggtctgcttctgtgaacaacgattgttatgcacgatctgctgtgaaggct
ggattgcacgagcacattcttgcttcggacatagtccaccgaaatattgactctactgtt
aacaattttggattgctttctacggaatcaacttttggatttgaatctgagacatccttc
acaagtgtacttgcggatattgttgaggctttagcaggagcaatttttattgattctgga
tacgataaacaaattgtctttcagagtatacgtcgtctcttagagcccttggtttctcca
gaaacgttgaggctccatcctggaagagatttcaatgattattgccaaaaaaagcattat
aatgtgcagaaactcgtcgagtgcttccaaaatggtgaggctatggttacaatagaggtt
gaagcggaaggggtcacatacaagcatacatcaactgcttctaataagataactgcacgt
aaattagctcaaaaacaagttttgaggtctctgaaggaaaatggtctctga
DBGET
integrated database retrieval system
