Malus domestica (apple): 103436481
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Entry
103436481 CDS
T03194
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103436481
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
103436481
NCBI-ProteinID:
XP_008373166
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Position
15:join(45823488..45823800,45824343..45824561,45825233..45825939,45826771..45827567,45827875..45827878)
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AA seq
679 aa
AA seq
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MSGGGCSVVWFRRDLRVEDNPALAAAVRAGGVVCVFIWAPDEEGPYYPGRVSRWWLKHSL
AHLDSSLKSLGASLITKRSTDSVSSLLEVVVSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVIDVHGRPFTTFDAFWGRCLSMPYDPDAPLLPPKRIISGDA
SRSPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLDYSNNRRKADGATT
SLLSPHLHFGEVSVRKAFHLARMKQVVWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVLDQKYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRKWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LSEMWQHEAASRAAVENGTEEGLGDSSESVPIAFSQDIQMEENNEPARNNPPGTRKYEDQ
MVPSITTSLVRAEEEETSLELQNLTEETRAEVPTDLIVNQEPRRDILNQGFFQTIHNNAL
PQSNAAIGLQHAVEDSTAESSSSTRRERDGGVVPVWSPSSSSYSEQFGSEDNGIGTSSYL
QRHPQSHQIMNWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgcagtgtggtttggttcaggagagatctgagggttgaagataac
ccagctttggcagctgcagtgagagcaggaggtgtggtttgtgtcttcatctgggctcct
gatgaagaaggcccttattatcctggaagggtgtcaagatggtggcttaaacacagcttg
gctcatctggattcctccctaaaaagtctgggtgcttctctcatcaccaaaagatccact
gacagtgtttcttctctccttgaagttgttgtttccactggtgccactcagcttttcttc
aaccacttatatgatcctatatcactggttagggatcacagggccaaggaggttttaact
gctcaaggcatagctgtgcgttcctttaatgcggatttgctctacgaaccatgggatgtt
attgatgtccatggtcggccgttcacaaccttcgatgccttttggggaagatgccttagc
atgccatatgacccggatgcaccacttcttccccctaagagaattatttcaggtgatgca
tcaaggtctccttctgatacattggtttttgaagatgaatccgagaagggaagtaatgca
cttcttgctcgagcatggtcacctgggtggagtaatgctgataaggctctgactacattt
ataaatggacccttacttgattactctaataaccgcagaaaggctgatggcgctacaaca
tctttactttctccccatttgcattttggggaggtgagtgtgagaaaggcatttcatctt
gctcgtatgaagcaggttgtttgggccaatgaaggcaacaaggctggtgaagagagtgta
aacttgtttctgaagtctattggtcttcgggaatattcaagatacattagttttaatcat
ccttacagtcatgaaagacctcttcttgggcacctaaagttcttcccctgggtattagat
caaaagtatttcaaggcatggagacaaggtagaactggctatccattggtggatgcgggc
atgagagagttgtgggccactggttggctacatgatcgaatacgagtagtagtttctagt
ttcttcgtaaaggttctgcaacttccatggagatgggggatgaagtatttctgggataca
ctcttagatgctgatcttgaaagcgatgctcttggttggcagtatatatctggtacttta
cctgatggtcgtgaatttgaccgcatagataatccacagtttgagggttacaaatttgat
ccaaatggagaatatgtgcggaagtggcttcctgaacttgctaggctaccaactgaatgg
atacaccacccgtggaatgcaccagaatctgttctacaagcagctggaattgaattagga
tcgaattaccctctacctattgtaggcatagatgcagcgaaaacccggttgcaagaagct
ttatcagagatgtggcagcacgaagctgcttcaagagccgctgttgaaaatgggactgag
gaaggacttggagactcctcagaatcagtaccaattgccttttctcaagacatacaaatg
gaggaaaataatgaacctgcaaggaacaaccctcctggcactcggaagtatgaggatcaa
atggtcccaagcattactacttcgttggttagagctgaagaggaagaaacttctttggaa
cttcaaaatttgacagaagaaaccagagcggaagtgcctacagacttaattgtgaatcag
gaaccaagaagagacatattaaaccaagggttttttcagactattcataacaatgctctt
ccacaatccaatgctgcaatagggctacaacacgctgttgaagattcgactgcagaatct
tccagtagcactaggcgagagagggatggaggtgtagttccagtttggtctccttcaagt
tctagctactcggagcagtttgggagtgaagacaatggcattggaacaagttcgtacttg
cagagacatcctcagtctcaccaaataatgaattggaggcggctatctcaaactgggtga
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