KEGG T03194: 103436954

Malus domestica (apple): 103436954

Entry

103436954         CDS       T03194

Name

(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5

K15264

25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103436954
Enzymes [BR:mdm01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     103436954
Ribosome biogenesis [BR:mdm03009]
Eukaryotic type
  Other ribosome biogenesis factors
   103436954

SSDB

Motif

Pfam:

Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like Methyltransf_25 Methyltransf_31 Ubie_methyltran PCMT FtsJ RrnaAD Methyltransf_4 Cons_hypoth95 RsmF-B_ferredox AcetylCoA_hydro Methyltransf_11 CO4A-B_CUB_C TRM ASPP2-like_RA

Other DBs

NCBI-GeneID:

103436954

NCBI-ProteinID:

XP_008373636

LinkDB

Position

15:complement(join(3670875..3671119,3671204..3671365,3671571..3671654,3671881..3671968,3672085..3672146,3672360..3672504,3672635..3672688,3672837..3672935,3673227..3673312,3673501..3673639,3673888..3673938,3674022..3674080,3674189..3674432))

AA seq 505 aa
MARLKHKAGPPPAAADKSENRRRLNMERSAYFSRREAAKVLKLVLQGDAKKRSVGTIKSL
VYSPSVRNKKGTFALVCQTLKYLQIIQEVLNAAEVLNSKWKKQDELVYIVTYDILFGQVS
SSAIGDAEKYLMRRQEALQSALARLLVKKKVKKVEDLIALYEIPDISIPRHVRVNTLKMD
VDTALLELKKQFQVQKDDLVPDLLILPPGSDLHDHPLIKDGSIFMQGKASSMVAAALAPK
PGWEVLDACSAPGNKTVHLAALMRGEGKVIACELNEERVKRLKETIRLSGASNIKVVHGD
FLDLNPEDPQFSKVRAILLDPSCSGSGTASARLDHLLPSSAPGQGADFASTERLNKLAAF
QRKALAHALSFPEVERVVYSTCSVNQVENEDVVKSVLPLAASNGFQLETPFPKWHRRGLP
VIEGAECLIRTDPKEDKEGFFIALFSRSSSNQQEAPNGTGRDATEASKRQRNYAVPHLNL
FKTWTHAQRMWRNNSKHIHSHCHCC

NT seq 1518 nt +upstreamnt +downstreamnt
atggcgcgcctaaagcacaaagccggcccgccgcctgcagccgccgataagtcagaaaac
cggcgtcgtttaaacatggagaggtcggcttacttctcccggagagaggctgcgaaggta
ttgaagctcgtcctccaaggcgacgccaagaagcggtccgtcggcaccatcaagtcgctc
gtttacagtccctcagtcaggaacaagaaaggcactttcgctttggtttgccaaacccta
aaatatcttcagattatccaagaggtcttgaatgctgccgaagtactgaatagcaagtgg
aagaagcaagatgagttggtttacatagtcacctacgacatccttttcggtcaggtgagt
tcatctgcaataggtgatgcggagaagtatctcatgcgtcgccaagaagctctgcagtcc
gctctggctcggcttttggtgaagaaaaaagtgaagaaagttgaagacttgatagctctt
tatgaaattcccgatatctcaatacctcgtcatgttcgagtaaatactctgaaaatggat
gttgacactgccttactcgaattaaagaagcaatttcaggttcaaaaggatgacctggtt
cctgacttgttgattcttccaccgggtagtgatcttcacgatcatcctctaataaaggat
ggaagtatttttatgcaaggaaaggcaagctctatggtggctgcagcccttgctccgaaa
ccaggatgggaggttcttgatgcatgctcggctcctggaaacaaaactgtgcaccttgca
gctcttatgagaggagagggaaaagtgatagcatgtgaactgaatgaagaaagggttaaa
cgtttaaaagagactatcagactttctggtgcttctaatattaaggttgtgcatggagat
ttcttagacttaaaccctgaagatcctcaattttccaaggtccgggccattcttttagat
ccttcctgctctggatctgggactgcttctgcaagattagatcatttgctcccatcttct
gctccaggtcagggtgccgattttgccagcacagaaagacttaacaagctcgccgccttt
cagagaaaagcactggctcatgctttatcttttccggaggtggagagagtcgtttacagc
acatgctctgtcaaccaagtcgaaaacgaagatgtcgttaaatctgtgctaccacttgct
gcatccaatggtttccaactggaaacccccttcccgaaatggcaccgccgtggtctcccc
gttatcgagggcgccgaatgcttgattaggaccgatccgaaggaggacaaagaaggcttc
ttcatcgctctgttttccaggagctccagcaaccaacaggaggcgcctaatggaaccggc
agagacgccaccgaagcctcgaagaggcagagaaattatgcagtacctcatctcaatctg
tttaaaacgtggacacatgcgcaacggatgtggcgtaataattccaaacacattcacagt
cattgccattgttgttga

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