KEGG   Malus domestica (apple): 103437100
Entry
103437100         CDS       T03194                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
mdm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103437100
   03083 Polycomb repressive complex
    103437100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103437100
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     103437100
  Histone modification proteins
   HAT complexes
    HATB complex
     103437100
   HDAC complexes
    Sin3A-HDAC complex
     103437100
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     103437100
    PRC2.2
     103437100
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     103437100
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103437100
  Chromatin remodeling factors
   NuRD complex
    103437100
   NuRF complex
    103437100
   NuRF complex (fruit fly)
    103437100
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz Beta-prop_EIPR1 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD_LRWD1 eIF2A Beta-prop_RIG_1st MIOS_WD40 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Phage_CRI
Other DBs
NCBI-GeneID: 103437100
NCBI-ProteinID: XP_028961311
LinkDB
Position
07:complement(join(8478424..8478646,8479676..8479771,8479876..8480000,8480734..8480886,8481170..8481496,8482212..8482556))
AA seq 422 aa
MGKDDEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPIDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATAKNKTLEAMQIFKVHEGVVEDVAWHLRHE
NLFGSVGDDQYLLVWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgggcaaagacgacgaagaaatgaggggagagatagaggagcggttgataaacgaggag
tacaagatatggaagaagaacactccgtttttgtacgatctggtcataacccatgcccta
gaatggccatcgcttactgtggagtggcttcccgaccgagaggagcctccggggaaggac
tattcggtgcagaagatgattttggggacccacacctccgagaacgagccgaattacctt
atgctcgctcaggttcagctgccgttggaggacgccgagaacgatgcgcggcattatgat
gatgatcgagctgaggttgggggtttcggttgcgccaatggaaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgttatatgcctcagaatccatttatt
attgccacaaagactgtcaatgctgaagtttttgtgttcgattatagcaaacatccatct
aagcctcccatagatggtgcatgcagtcctgatttgaggctgaggggccacagcactgaa
ggatatggtttatcgtggagtaagtttaagcagggtcatttactcagtggttctgatgat
gctcagatatgcctgtgggacattaatgcgactgctaagaacaaaacccttgaagctatg
cagatatttaaggttcatgaaggtgtagtagaagatgtagcatggcatttgaggcatgaa
aacttatttggttctgttggcgatgatcaataccttcttgtatgggatctccggactcca
tcagttaccaagcctgttcaatctgtagttgctcatcaaagtgaggttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatctactgacaaaactgttaagttg
tttgatctacgcaaaatcaatactgcactccacacctttgattgtcataaggaggaggtt
ttccaagttggttggaatccaaagaatgaaactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcagaatcgatgaagagcagacaccagatgatgcagaa
gacggccctccagagttgctttttattcatgggggtcacaccagcaaaatatctgatttt
tcgtggaacccctgtgaagattgggttatttctagcgtcgctgaagataacatactccaa
atatggcagatggcagagaacatttaccatgacgaagatgatttacctgaagaaccggca
aagccctag

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