Malus domestica (apple): 103437229
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Entry
103437229 CDS
T03194
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
mdm
Malus domestica (apple)
Pathway
mdm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103437229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103437229
Membrane trafficking [BR:
mdm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103437229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
103437229
NCBI-ProteinID:
XP_008373925
LinkDB
All DBs
Position
05:join(3298475..3298564,3298677..3298878,3298983..3299062,3299844..3300071,3300296..3300421,3300548..3300628,3300718..3300859,3300969..3301147,3309932..3310087,3310427..3310534,3310616..3310737,3311578..3311709,3312203..3312260)
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AA seq
567 aa
AA seq
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MVLVTAVRDYLSRMLQDISGMKVLILDSHTVSIVSVAYSQSELLQKEVFLVELVDSISKS
RESMSHLKAVYFLAPTSENIQFLRRHLVSPRFGEYHLFFSNILKDTQIHILADSDEHEVV
QQLQEFYADFVATDPYHFTLNMPSNHMYMLPAVVDHSNLQRLCDRVVDGIAAVFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRNIGKFPKDQEEVVLSSEQDAFFKKNMYENFGDIGMNIKQLV
DEFQQISKCNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSKLVEERKLMVVSQ
TEQELACNGGQVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLSS
KSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLFQT
MESITKGRLRDVDYPFVGNHFQQGRPQEVVIFIVGGTTYEESRCVALQNAMNTGIRFILG
GSVILNSKRFLKDLEEAQRIARTSNAI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtcacggctgtacgggattacttaagccggatgttgcaggacatctcaggc
atgaaggttctcatcctcgattcccacacggttagtatagtgagcgtggcgtattcgcaa
tccgagcttctgcagaaagaagtgtttttggtggaattggtagactccatttccaagtcc
agagaatccatgtcgcatctcaaagccgtttactttctcgcacccacttcagagaacata
cagtttttgcgccggcacttggtgtctcctcgattcggggagtatcacctctttttctcc
aacatattgaaggatacccagattcatattttagctgattcagatgagcatgaagttgtg
cagcagcttcaggagttctatgcagactttgttgcaactgatccttaccatttcactttg
aatatgccatcaaatcacatgtatatgctcccagcagttgtagatcattcaaatttacag
cgcttatgtgatcgagtagttgatggaattgcagctgtttttttggcattaaaacgaaga
ccagttattcgttatcagagaacatctgatattgctaaaaggattgcgcaggaaacagca
aagctgatgtaccagcaggaaagtggactttttgatttcagacgaacagaaatttctccg
ttgttgctggtaattgataggagggatgatcctgtgaccccgttgctgaatcagtggacc
tatcaggccatggttcacgaattgattggtattcaagacaacaaagtcgacttaagaaac
attggaaaatttccaaaggatcaagaggaggttgtgctgtcatcagagcaagatgctttt
ttcaaaaagaacatgtatgagaactttggtgatattgggatgaacatcaagcagttggtt
gatgaatttcagcaaatttcaaaatgtaaccagaacattcagacgatagaggacatggcc
aagtttgttgacaattaccctgagtacagaaagatgcatggaaatgtttcaaagcatgtg
gcactggtaacagaaatgagcaagctagttgaagagcgaaaacttatggtagtgtcacag
acagagcaggagttggcttgcaacggtgggcaggtggcagcttttgaggcagtgacaaat
ctattaaacaatgaaagcgtatctgatattgaccgcctacgacttgtcatgctgtatgct
ttacgctatgagaaggagagtcctgtgcaactaatgcagttatttaacaaactgtcatcc
aagtctcccaagtacaagcctgggcttgtccagtttctcttgaagcaagcgggtgtggat
aagcgaaccggggatctttatggaaatcgagatttcttaaacatcgcgcgtaacatggct
cgtgggctgaagggggttgagaatgtgtacacacaacaccagcctcttctcttccaaact
atggaaagcatcaccaagggacggctgagagatgtggattacccatttgtgggaaatcat
ttccagcagggcaggcctcaagaagtggtcattttcattgttggggggacaacgtacgag
gagtctcgttgtgtagctttacaaaatgctatgaatactggaattcgttttatacttggt
ggttctgtgattctcaattctaaaaggttcttgaaggacttggaagaagctcagagaata
gctcgtactagcaatgccatctga
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