KEGG T03194: 103437480

Malus domestica (apple): 103437480

Entry

103437480         CDS       T03194

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

mdm Malus domestica (apple)

Pathway

mdm04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:mdm00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103437480
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103437480
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103437480
Membrane trafficking [BR:mdm04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    103437480
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    103437480
Exosome [BR:mdm04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103437480

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank BAR Ank_5 Ank_2 Ank_3 PH Ank_4 BAR_2 PH_11 PH_8 ANK_LRRK2 PH_20 Ank_KRIT1 PH_13 TPR_21

Other DBs

NCBI-GeneID:

103437480

NCBI-ProteinID:

XP_008374168

LinkDB

Position

06:join(26322423..26322467,26323009..26323085,26323425..26323525,26323602..26323672,26323809..26323871,26324042..26324086,26324239..26324304,26324424..26324471,26324566..26324661,26324738..26324779,26324902..26325117,26325207..26325338,26325417..26325641,26325747..26325833,26325918..26326253,26326331..26326476,26326552..26326645,26326745..26326910,26326989..26327238,26327347..26327461)

AA seq 806 aa
MHFAKLDDSPMFRQQIQGLEESAESLRGRCYKFYKGCRKYTEGLGEAYDGEIAFITALES
FGGGHNDPIFSALGGQVMSRFTIALREIATYKEVLRSQIEHMVNDRLVNIVHVDLHEVKE
SRKRFDKTSLVYDQAREKFLSLRKSTRMDIAASIEEELQNARSSFEQARFSLVAVLSDIE
AKKRFEFLEAVSGVMDAHLRYFKQSYELLHAMEPYIHQVLAYAQQTRESCNQEQMCLNER
IQEYKKQIDRESTQSLSGIHGSTKGDGPQPFSRKSHKVIEEVMQSAAKGKVQTIRQGYLS
KRSSNLRGDWKRRYFILDSRGMLYYYRKPWSWPSYGSPSSPQKNNSSENGSGLLSRWLSS
HYHGGVHDEKSVASHTVNLLTSTIKVDADQTDLRFCFRIISPAKIYTLQAENALDQMDWI
EKITGVIASLLSFQTPERRLSTSPTGSDDQFSGNEGNLLESASDAEQTAIQELSPKITAY
NYLRISKSMQPHKLKEKSEKPIDILRRVCGNDKCADCGAPEPDWASLNLGILICIECSGV
HRNLGVHVSKVRSLTLDVKVWEPSVLTLFQSLGNAFANSIWEEMLYSRSSLQADNMPIGF
SKADRNEPFLMIKPCNDDLNSTKERYIQAKYAEKLFVRRTKNNHKLHVMGQQLCKSVRAN
DKKAVYRYIIGYEADVNSRSVQALDDISGDKPSSSNLNSVTQTEIQPAEDTAEGCSLLHL
ACQSADIGMVELLLQYGANVKATDSKGQTPLHYSVIRGNIAIAKLLLTRGADPKATDREG
KTPSELVSDSASKDNGMLALLTNSGR

NT seq 2421 nt +upstreamnt +downstreamnt
atgcatttcgcaaagctcgatgattcgcctatgttccgccaacagatacaaggcttggag
gaaagtgcagagtcactgaggggaagatgttataagttctacaaaggatgccgaaagtac
acagaaggacttggagaagcgtatgatggtgaaatcgcttttataactgccctcgaaagt
tttgggggaggccacaatgatcctattttttcagctttaggaggccaggttatgtccaga
ttcacaattgcattaagagaaatcgcgacgtacaaggaagttttgcgttcacagatagag
cacatggtaaatgataggctggtgaacattgtccatgttgacctccatgaagtcaaggaa
tcccgaaagcgttttgacaagacttcacttgtatatgatcaggcacgcgagaagtttctg
tcattgaggaagagcacgaggatggatatagctgctagtatagaggaggaactgcagaat
gcaagatcctcgtttgagcaagcccgcttcagcctggttgctgttctttctgatatcgag
gccaaaaagaggtttgagtttctggaagctgttagcggggtgatggacgctcatcttcgt
tacttcaaacagagttatgagttactgcatgcaatggaaccctacattcatcaggttttg
gcttacgcgcaacagacacgagaaagttgcaaccaggaacagatgtgtctcaacgaaagg
atacaagagtacaaaaagcagattgatagggaaagtacacagtccttgagcggtatccat
ggttctaccaaaggagatggcccgcaacctttctctaggaaatcacataaagtgatcgag
gaagtgatgcaatctgctgcaaaggggaaggtacaaaccattcggcaaggatatctatca
aagcgttcctccaatttgagaggtgactggaaaagaaggtatttcattcttgatagtcga
gggatgctgtactactatcgcaaaccatggagttggccatcttatggtagtccatcttct
ccacagaagaataattcctctgaaaatggctccgggcttttgagtcgatggctttcatct
cattaccatggcggtgtacatgatgagaaatctgttgctagccacactgtgaacttgctg
acatcaacgataaaggttgatgcagaccagacggacttaaggttctgcttcagaattata
tcacctgctaaaatctacactttacaggcagagaatgcacttgaccaaatggattggatt
gagaaaataactggagtaatagcttcattgttgagtttccagacacctgagaggcgtctc
tcaactagccctacaggaagcgacgatcaattctctggaaacgagggcaacttattagaa
agcgcttctgatgctgagcagacagctatccaggaactctcacctaagatcacagcttac
aattatctacgaatctctaaaagtatgcagccgcacaagctcaaagagaaaagtgagaaa
ccaattgacatactgagaagagtgtgcggtaatgacaaatgtgctgattgtggtgcacct
gaaccagattgggcatctttgaaccttggaattcttatttgcattgaatgctctggtgtt
catcgtaatcttggtgtacatgtatcaaaggttcgatcactaacacttgatgtgaaagta
tgggaaccttctgtcttaaccttgtttcaatcactgggaaatgcttttgcaaactcgatt
tgggaggagatgttgtattcaagaagtagtttgcaggctgataacatgcctataggtttc
tccaaggctgataggaatgagccgtttcttatgataaagccatgtaatgacgatcttaat
tcgacaaaggagaggtatattcaagcaaagtatgcagaaaaactttttgttcgtcgtaca
aaaaacaatcacaaacttcatgtcatggggcaacagttgtgcaaaagcgtccgtgctaat
gacaagaaagcagtttaccgctatatcattggttatgaagcagatgttaattctagatct
gtgcaagcattagatgatatttctggagacaagccctcctcgagtaacttaaattccgtc
actcaaactgaaattcagcctgcagaagacactgctgaaggctgttccctgcttcaccta
gcctgccaaagtgccgatattggcatggtagagctccttttacagtacggtgccaacgta
aaagctactgattcaaaaggtcaaacaccacttcattattccgttataagagggaatatt
gctattgcaaagttgcttctaacaaggggagctgatccaaaagccactgacagagaaggt
aaaacaccaagtgagcttgtatcagactcagcctccaaagacaatgggatgctggctctt
ttaacaaactccggcagatga

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